RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 DNAAF4Q8WXU2 420 aa25.37■■□□□ 1.65
HPS4-213ENST00000483631 JARID2Q92833 1246 aaPredicted RBP25.37■■□□□ 1.65
HPS4-213ENST00000483631 PLA2G12BQ9BX93 195 aa25.37■■□□□ 1.65
HPS4-213ENST00000483631 DBNDD1Q9H9R9 158 aa25.37■■□□□ 1.65
HPS4-213ENST00000483631 ANKIB1Q9P2G1 1089 aa25.37■■□□□ 1.65
HPS4-213ENST00000483631 GGA1Q9UJY5 639 aa25.37■■□□□ 1.65
HPS4-213ENST00000483631 XDHP47989 1333 aa25.37■■□□□ 1.65
HPS4-213ENST00000483631 H7C1D1 291 aa25.36■■□□□ 1.65
HPS4-213ENST00000483631 RIMBP2O15034 1052 aa25.36■■□□□ 1.65
HPS4-213ENST00000483631 ECE2O60344 883 aa25.36■■□□□ 1.65
HPS4-213ENST00000483631 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
HPS4-213ENST00000483631 FAM9BQ8IZU0 186 aa25.36■■□□□ 1.65
HPS4-213ENST00000483631 LINS1Q8NG48 757 aa25.36■■□□□ 1.65
HPS4-213ENST00000483631 CNOT7Q9UIV1 285 aaKnown RBP25.36■■□□□ 1.65
HPS4-213ENST00000483631 SALL2Q9Y467 1007 aaPredicted RBP25.36■■□□□ 1.65
HPS4-213ENST00000483631 PSMD14O00487 310 aa25.35■■□□□ 1.65
HPS4-213ENST00000483631 UFL1O94874 794 aa25.35■■□□□ 1.65
HPS4-213ENST00000483631 GCKRQ14397 625 aa25.35■■□□□ 1.65
HPS4-213ENST00000483631 PSME4Q14997 1843 aa25.35■■□□□ 1.65
HPS4-213ENST00000483631 BSDC1Q9NW68 430 aaPredicted RBP25.34■■□□□ 1.65
HPS4-213ENST00000483631 ZNF609O15014 1411 aa25.34■■□□□ 1.65
HPS4-213ENST00000483631 SCN9AQ15858 1988 aa25.34■■□□□ 1.65
HPS4-213ENST00000483631 ATP2B4P23634 1241 aa25.33■■□□□ 1.65
HPS4-213ENST00000483631 DEFB115Q30KQ5 88 aa25.33■■□□□ 1.65
HPS4-213ENST00000483631 UBE3BQ7Z3V4 1068 aa25.33■■□□□ 1.65
HPS4-213ENST00000483631 CCDC85AQ96PX6 553 aaPredicted RBP25.33■■□□□ 1.65
HPS4-213ENST00000483631 VEGFBP49765 207 aa25.32■■□□□ 1.64
HPS4-213ENST00000483631 MICALL2Q8IY33 904 aa25.32■■□□□ 1.64
HPS4-213ENST00000483631 GREM2Q9H772 168 aa25.32■■□□□ 1.64
HPS4-213ENST00000483631 SPINK5Q9NQ38 1064 aaPredicted RBP25.32■■□□□ 1.64
HPS4-213ENST00000483631 VIL1P09327 827 aaKnown RBP25.31■■□□□ 1.64
HPS4-213ENST00000483631 HIRAP54198 1017 aaPredicted RBP25.31■■□□□ 1.64
HPS4-213ENST00000483631 CASP7P55210 303 aa25.31■■□□□ 1.64
HPS4-213ENST00000483631 ZNF521Q96K83 1311 aa25.31■■□□□ 1.64
HPS4-213ENST00000483631 DOK7Q18PE1 504 aa25.3■■□□□ 1.64
HPS4-213ENST00000483631 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
HPS4-213ENST00000483631 ABT1Q9ULW3 272 aaKnown RBP25.3■■□□□ 1.64
HPS4-213ENST00000483631 ZBTB12Q9Y330 459 aaPredicted RBP25.3■■□□□ 1.64
HPS4-213ENST00000483631 SPEF2Q9C093 1822 aa25.3■■□□□ 1.64
HPS4-213ENST00000483631 G3V3G9 751 aa25.29■■□□□ 1.64
HPS4-213ENST00000483631 CSF1RP07333 972 aa25.29■■□□□ 1.64
HPS4-213ENST00000483631 DCAF8Q5TAQ9 597 aa25.29■■□□□ 1.64
HPS4-213ENST00000483631 CDC37L1Q7L3B6 337 aa25.29■■□□□ 1.64
HPS4-213ENST00000483631 GPR101Q96P66 508 aaPredicted RBP25.29■■□□□ 1.64
HPS4-213ENST00000483631 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
HPS4-213ENST00000483631 CST9Q5W186 159 aa25.28■■□□□ 1.64
HPS4-213ENST00000483631 PODNQ7Z5L7 613 aa25.28■■□□□ 1.64
HPS4-213ENST00000483631 MED23Q9ULK4 1368 aa25.28■■□□□ 1.64
HPS4-213ENST00000483631 TRAF5O00463 557 aa25.27■■□□□ 1.64
HPS4-213ENST00000483631 IGHMBP2P38935 993 aaKnown RBP25.27■■□□□ 1.64
HPS4-213ENST00000483631 COL13A1Q5TAT6 717 aaPredicted RBP25.27■■□□□ 1.64
HPS4-213ENST00000483631 AGBL3Q8NEM8 1001 aa25.27■■□□□ 1.64
HPS4-213ENST00000483631 KCNQ5Q9NR82 932 aa25.27■■□□□ 1.64
HPS4-213ENST00000483631 TLL2Q9Y6L7 1015 aa25.27■■□□□ 1.64
HPS4-213ENST00000483631 THSD7BQ9C0I4 1608 aa25.26■■□□□ 1.63
HPS4-213ENST00000483631 ECE1P42892 770 aa25.26■■□□□ 1.63
HPS4-213ENST00000483631 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
HPS4-213ENST00000483631 POLR2AP24928 1970 aaKnown RBP25.25■■□□□ 1.63
HPS4-213ENST00000483631 SHTN1A0MZ66 631 aa25.25■■□□□ 1.63
HPS4-213ENST00000483631 ITGA6P23229 1130 aa25.25■■□□□ 1.63
HPS4-213ENST00000483631 FMR1Q06787 632 aaKnown RBP eCLIP25.25■■□□□ 1.63
HPS4-213ENST00000483631 BEND3Q5T5X7 828 aa25.25■■□□□ 1.63
HPS4-213ENST00000483631 HHIPL1Q96JK4 782 aa25.25■■□□□ 1.63
HPS4-213ENST00000483631 GLIS2Q9BZE0 524 aaPredicted RBP25.25■■□□□ 1.63
HPS4-213ENST00000483631 LEMD3Q9Y2U8 911 aa25.25■■□□□ 1.63
HPS4-213ENST00000483631 CCT4P50991 539 aaKnown RBP25.24■■□□□ 1.63
HPS4-213ENST00000483631 RSBN1LQ6PCB5 846 aaPredicted RBP25.24■■□□□ 1.63
HPS4-213ENST00000483631 SAMD7Q7Z3H4 446 aa25.24■■□□□ 1.63
HPS4-213ENST00000483631 ANKRD2Q9GZV1 360 aa25.24■■□□□ 1.63
HPS4-213ENST00000483631 WBP1LQ9NX94 342 aa25.24■■□□□ 1.63
HPS4-213ENST00000483631 AIDAQ96BJ3 306 aa25.23■■□□□ 1.63
HPS4-213ENST00000483631 CELF2O95319 508 aaKnown RBP25.22■■□□□ 1.63
HPS4-213ENST00000483631 ZNF280AP59817 542 aaPredicted RBP25.22■■□□□ 1.63
HPS4-213ENST00000483631 MAP2K1Q02750 393 aaPredicted RBP25.22■■□□□ 1.63
HPS4-213ENST00000483631 FAM161AQ3B820 660 aa25.22■■□□□ 1.63
HPS4-213ENST00000483631 SAPCD2Q86UD0 394 aa25.22■■□□□ 1.63
HPS4-213ENST00000483631 MPHOSPH8Q99549 860 aa25.22■■□□□ 1.63
HPS4-213ENST00000483631 USP17L3A6NCW0 530 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 USP17L4A6NCW7 530 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 F6X3S4 739 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 ALDH1L1O75891 902 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 TBC1D10BQ4KMP7 808 aaPredicted RBP25.21■■□□□ 1.63
HPS4-213ENST00000483631 USP17L1Q7RTZ2 530 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 GMLQ99445 158 aa25.21■■□□□ 1.63
HPS4-213ENST00000483631 ANKRD18BA2A2Z9 1011 aa25.2■■□□□ 1.62
HPS4-213ENST00000483631 CTCFP49711 727 aaPredicted RBP25.2■■□□□ 1.62
HPS4-213ENST00000483631 KIF4BQ2VIQ3 1234 aa25.2■■□□□ 1.62
HPS4-213ENST00000483631 COA1Q9GZY4 146 aa25.2■■□□□ 1.62
HPS4-213ENST00000483631 PRDM10Q9NQV6 1147 aa25.2■■□□□ 1.62
HPS4-213ENST00000483631 FOXN1O15353 648 aa25.19■■□□□ 1.62
HPS4-213ENST00000483631 EGFRP00533 1210 aa25.19■■□□□ 1.62
HPS4-213ENST00000483631 MMP14P50281 582 aa25.19■■□□□ 1.62
HPS4-213ENST00000483631 DCPSQ96C86 337 aaKnown RBP25.19■■□□□ 1.62
HPS4-213ENST00000483631 E9PSI1 815 aa25.18■■□□□ 1.62
HPS4-213ENST00000483631 GRM8O00222 908 aa25.18■■□□□ 1.62
HPS4-213ENST00000483631 FOXO4P98177 505 aa25.18■■□□□ 1.62
HPS4-213ENST00000483631 KRT26Q7Z3Y9 468 aa25.18■■□□□ 1.62
HPS4-213ENST00000483631 USP48Q86UV5 1035 aa25.18■■□□□ 1.62
HPS4-213ENST00000483631 TNS4Q8IZW8 715 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms