RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 EIF2AK2P19525 551 aaKnown RBP7.48□□□□□ -1.21
NSMCE4A-210ENST00000483541 HFE2Q6ZVN8 426 aa7.48□□□□□ -1.21
NSMCE4A-210ENST00000483541 FBXO11Q86XK2 927 aa7.48□□□□□ -1.21
NSMCE4A-210ENST00000483541 OR13H1Q8NG92 308 aa7.48□□□□□ -1.21
NSMCE4A-210ENST00000483541 SEPT3Q9UH03 358 aa7.48□□□□□ -1.21
NSMCE4A-210ENST00000483541 TMEM88BA6NKF7 163 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 RPLP1P05386 114 aaKnown RBP7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 SSFA2P28290 1259 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 MBTPS1Q14703 1052 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 C14orf37Q86TY3 774 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 HELQQ8TDG4 1101 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 GPR152Q8TDT2 470 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 C1orf115Q9H7X2 142 aa7.47□□□□□ -1.21
NSMCE4A-210ENST00000483541 J3QW42 95 aa7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 TTC39BQ5VTQ0 682 aaPredicted RBP7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 PDE12Q6L8Q7 609 aaKnown RBP7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 TXNRD3Q86VQ6 643 aa7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 KRTAP9-9Q9BYP9 154 aa7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 KRTAP9-4Q9BYQ2 154 aa7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 SRA1Q9HD15 236 aaKnown RBP7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
NSMCE4A-210ENST00000483541 HYAL2Q12891 473 aa7.45□□□□□ -1.22
NSMCE4A-210ENST00000483541 RSPO4Q2I0M5 234 aaPredicted RBP7.45□□□□□ -1.22
NSMCE4A-210ENST00000483541 NKAPLQ5M9Q1 402 aa7.45□□□□□ -1.22
NSMCE4A-210ENST00000483541 IGF2-ASQ6U949 168 aa7.45□□□□□ -1.22
NSMCE4A-210ENST00000483541 NSUN5Q96P11 429 aaKnown RBP7.45□□□□□ -1.22
NSMCE4A-210ENST00000483541 BTBD11A6QL63 1104 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 XKR5Q6UX68 686 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 MAP4K3Q8IVH8 894 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 DCAF11Q8TEB1 546 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 SPACA7Q96KW9 195 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 MUC3BQ9H195 1237 aa7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 ABI2Q9NYB9 513 aaPredicted RBP7.44□□□□□ -1.22
NSMCE4A-210ENST00000483541 PCSK2P16519 638 aa7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 NOM1Q5C9Z4 860 aaKnown RBP7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 USP21Q9UK80 565 aa7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 MTMR7Q9Y216 660 aa7.43□□□□□ -1.22
NSMCE4A-210ENST00000483541 DLL1O00548 723 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 DEAF1O75398 565 aaPredicted RBP7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 KIF4AO95239 1232 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 H2AFB1P0C5Y9 115 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 H2AFB2P0C5Z0 115 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 SCNN1AP37088 669 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 ALKBH2Q6NS38 261 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 ELP3Q9H9T3 547 aa7.42□□□□□ -1.22
NSMCE4A-210ENST00000483541 NPR3P17342 541 aa7.41□□□□□ -1.22
NSMCE4A-210ENST00000483541 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
NSMCE4A-210ENST00000483541 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 MZF1P28698 734 aaPredicted RBP7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 ARTNQ5T4W7 220 aa7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 COL13A1Q5TAT6 717 aaPredicted RBP7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 ATCAYQ86WG3 371 aa7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 TMEM130Q8N3G9 435 aa7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 TTC16Q8NEE8 873 aa7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 ZFP64Q9NPA5 681 aa7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 PPME1Q9Y570 386 aa7.4□□□□□ -1.22
NSMCE4A-210ENST00000483541 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 DYRK3O43781 588 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 EIF1AXP47813 144 aaKnown RBP7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 CEP120Q8N960 986 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 EDEM1Q92611 657 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 PMEPA1Q969W9 287 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 TRIM33Q9UPN9 1127 aa7.39□□□□□ -1.23
NSMCE4A-210ENST00000483541 FAM13AO94988 1023 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 PDGFAP04085 211 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 MPSTP25325 297 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 DNM1Q05193 864 aaKnown RBP7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 SETDB1Q15047 1291 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 PHLDB3Q6NSJ2 640 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 PBX4Q9BYU1 374 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 TMEM63CQ9P1W3 806 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 USTQ9Y2C2 406 aa7.38□□□□□ -1.23
NSMCE4A-210ENST00000483541 USP5P45974 858 aa7.37□□□□□ -1.23
NSMCE4A-210ENST00000483541 IREB2P48200 963 aaKnown RBP7.37□□□□□ -1.23
NSMCE4A-210ENST00000483541 CEP135Q66GS9 1140 aa7.37□□□□□ -1.23
NSMCE4A-210ENST00000483541 NCAPG2Q86XI2 1143 aa7.37□□□□□ -1.23
NSMCE4A-210ENST00000483541 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
NSMCE4A-210ENST00000483541 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
NSMCE4A-210ENST00000483541 CYP2E1P05181 493 aaPredicted RBP7.36□□□□□ -1.23
NSMCE4A-210ENST00000483541 NOS3P29474 1203 aa7.36□□□□□ -1.23
NSMCE4A-210ENST00000483541 CDC27P30260 824 aa7.36□□□□□ -1.23
NSMCE4A-210ENST00000483541 FKBP4Q02790 459 aaKnown RBP eCLIP7.36□□□□□ -1.23
NSMCE4A-210ENST00000483541 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
NSMCE4A-210ENST00000483541 TP53INP1Q96A56 240 aa7.36□□□□□ -1.23
NSMCE4A-210ENST00000483541 RASSF4Q9H2L5 321 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms