RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
LRRFIP1-212ENST00000483443 KRT26Q7Z3Y9 468 aa16.67■□□□□ 0.26
LRRFIP1-212ENST00000483443 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
LRRFIP1-212ENST00000483443 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
LRRFIP1-212ENST00000483443 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
LRRFIP1-212ENST00000483443 ZC3H12CQ9C0D7 883 aaKnown RBP16.67■□□□□ 0.26
LRRFIP1-212ENST00000483443 SHTN1A0MZ66 631 aa16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 GPSM2P81274 684 aa16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 CALD1Q05682 793 aaKnown RBP16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 TBC1D10BQ4KMP7 808 aaPredicted RBP16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 SAMD7Q7Z3H4 446 aa16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 C2orf69Q8N8R5 385 aa16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 POLLQ9UGP5 575 aa16.66■□□□□ 0.26
LRRFIP1-212ENST00000483443 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
LRRFIP1-212ENST00000483443 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
LRRFIP1-212ENST00000483443 TBC1D16Q8TBP0 767 aa16.65■□□□□ 0.26
LRRFIP1-212ENST00000483443 CHMP4AQ9BY43 222 aa16.65■□□□□ 0.26
LRRFIP1-212ENST00000483443 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
LRRFIP1-212ENST00000483443 DOK7Q18PE1 504 aa16.64■□□□□ 0.25
LRRFIP1-212ENST00000483443 KIF4BQ2VIQ3 1234 aa16.64■□□□□ 0.25
LRRFIP1-212ENST00000483443 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
LRRFIP1-212ENST00000483443 GBA2Q9HCG7 927 aaPredicted RBP16.64■□□□□ 0.25
LRRFIP1-212ENST00000483443 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
LRRFIP1-212ENST00000483443 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
LRRFIP1-212ENST00000483443 UFL1O94874 794 aa16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 MLLT1Q03111 559 aaPredicted RBP16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 RBM26Q5T8P6 1007 aaKnown RBP16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 SULF1Q8IWU6 871 aa16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
LRRFIP1-212ENST00000483443 DDX58O95786 925 aaKnown RBP16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 GNAI1P63096 354 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 MCOLN1Q9GZU1 580 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 IFT57Q9NWB7 429 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 TAF1P21675 1872 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
LRRFIP1-212ENST00000483443 ADM5C9JUS6 153 aa16.61■□□□□ 0.25
LRRFIP1-212ENST00000483443 VIL1P09327 827 aaKnown RBP16.61■□□□□ 0.25
LRRFIP1-212ENST00000483443 MYD88Q99836 296 aa16.61■□□□□ 0.25
LRRFIP1-212ENST00000483443 PDE8AO60658 829 aa16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 EGFRP00533 1210 aa16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 PCCAP05165 728 aaPredicted RBP16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 ZNF157P51786 506 aaPredicted RBP16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 DGKZQ13574 1117 aa16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 SAGE1Q9NXZ1 904 aa16.6■□□□□ 0.25
LRRFIP1-212ENST00000483443 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
LRRFIP1-212ENST00000483443 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
LRRFIP1-212ENST00000483443 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
LRRFIP1-212ENST00000483443 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
LRRFIP1-212ENST00000483443 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
LRRFIP1-212ENST00000483443 XDHP47989 1333 aa16.59■□□□□ 0.25
LRRFIP1-212ENST00000483443 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
LRRFIP1-212ENST00000483443 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
LRRFIP1-212ENST00000483443 CCDC30Q5VVM6 783 aa16.58■□□□□ 0.24
LRRFIP1-212ENST00000483443 RSBN1LQ6PCB5 846 aaPredicted RBP16.58■□□□□ 0.24
LRRFIP1-212ENST00000483443 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
LRRFIP1-212ENST00000483443 ZNF609O15014 1411 aa16.58■□□□□ 0.24
LRRFIP1-212ENST00000483443 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
LRRFIP1-212ENST00000483443 RGS19P49795 217 aa16.57■□□□□ 0.24
LRRFIP1-212ENST00000483443 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
LRRFIP1-212ENST00000483443 COL4A1P02462 1669 aa16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 APAF1O14727 1248 aa16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 SLC10A3P09131 477 aa16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 ZNF280AP59817 542 aaPredicted RBP16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 CDCA5Q96FF9 252 aa16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 ZIC5Q96T25 663 aa16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
LRRFIP1-212ENST00000483443 USP17L8P0C7I0 530 aa16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 FKBP1BP68106 108 aa16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 NEXNQ0ZGT2 675 aa16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 SCARF1Q14162 830 aa16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 ANGEL2Q5VTE6 544 aaKnown RBP16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 PRKRIP1Q9H875 184 aaPredicted RBP16.55■□□□□ 0.24
LRRFIP1-212ENST00000483443 PITPNM2Q9BZ72 1349 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 USP17L3A6NCW0 530 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 USP17L4A6NCW7 530 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 CTSWP56202 376 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 USP17L1Q7RTZ2 530 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 MYOZ2Q9NPC6 264 aa16.54■□□□□ 0.24
LRRFIP1-212ENST00000483443 TRPA1O75762 1119 aa16.53■□□□□ 0.24
LRRFIP1-212ENST00000483443 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
LRRFIP1-212ENST00000483443 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
LRRFIP1-212ENST00000483443 MED23Q9ULK4 1368 aa16.52■□□□□ 0.24
LRRFIP1-212ENST00000483443 ASTN2O75129 1339 aaPredicted RBP16.52■□□□□ 0.24
LRRFIP1-212ENST00000483443 CASP8AP2Q9UKL3 1982 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms