RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 IGFBP4P22692 258 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 MLECQ14165 292 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 GRIK5Q16478 980 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 KRT25Q7Z3Z0 450 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 DMRTC2Q8IXT2 367 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-217ENST00000483442 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 USP20Q9Y2K6 914 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 PCF11O94913 1555 aaKnown RBP6.17□□□□□ -1.42
LRCH3-217ENST00000483442 FAM196BA6NMK8 535 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 TARSP26639 723 aaKnown RBP6.16□□□□□ -1.42
LRCH3-217ENST00000483442 WEE1P30291 646 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 IDH3AP50213 366 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 DGKZQ13574 1117 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 ADGRE1Q14246 886 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 MBTPS1Q14703 1052 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 CDCA8Q53HL2 280 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 CFAP70Q5T0N1 1121 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 IFT43Q96FT9 208 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 VRTNQ9H8Y1 702 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 LRFN2Q9ULH4 789 aa6.16□□□□□ -1.42
LRCH3-217ENST00000483442 DISP1Q96F81 1524 aa6.15□□□□□ -1.42
LRCH3-217ENST00000483442 ZCCHC11Q5TAX3 1644 aaKnown RBP6.15□□□□□ -1.42
LRCH3-217ENST00000483442 A6NJR5 290 aa6.15□□□□□ -1.42
LRCH3-217ENST00000483442 CPB1P15086 417 aa6.15□□□□□ -1.42
LRCH3-217ENST00000483442 MLLT1Q03111 559 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-217ENST00000483442 LPIN3Q9BQK8 851 aa6.15□□□□□ -1.42
LRCH3-217ENST00000483442 ADAMTSL3P82987 1691 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 OPLAHO14841 1288 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 SASH3O75995 380 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 ELNP15502 786 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 CEBPAP49715 358 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-217ENST00000483442 HIF1AQ16665 826 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 TMEM132AQ24JP5 1023 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 PRSS36Q5K4E3 855 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 PERM1Q5SV97 790 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 FAM35AQ86V20 835 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-217ENST00000483442 PNMA5Q96PV4 448 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 ARAP3Q8WWN8 1544 aa6.14□□□□□ -1.43
LRCH3-217ENST00000483442 C9orf172C9J069 976 aa6.13□□□□□ -1.43
LRCH3-217ENST00000483442 RGS9O75916 674 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-217ENST00000483442 MICAL2O94851 1124 aa6.13□□□□□ -1.43
LRCH3-217ENST00000483442 FMR1NBQ8N0W7 255 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-217ENST00000483442 LENG1Q96BZ8 264 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-217ENST00000483442 NACC1Q96RE7 527 aa6.13□□□□□ -1.43
LRCH3-217ENST00000483442 EFCC1Q9HA90 598 aa6.13□□□□□ -1.43
LRCH3-217ENST00000483442 IQGAP2Q13576 1575 aa6.13□□□□□ -1.43
LRCH3-217ENST00000483442 MAP3K6O95382 1288 aa6.12□□□□□ -1.43
LRCH3-217ENST00000483442 NRG1Q02297 640 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-217ENST00000483442 FAM26DQ5JW98 314 aa6.12□□□□□ -1.43
LRCH3-217ENST00000483442 HFE2Q6ZVN8 426 aa6.12□□□□□ -1.43
LRCH3-217ENST00000483442 DHX32Q7L7V1 743 aaKnown RBP6.12□□□□□ -1.43
LRCH3-217ENST00000483442 PHLDB1Q86UU1 1377 aa6.12□□□□□ -1.43
LRCH3-217ENST00000483442 SSBP4Q9BWG4 385 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-217ENST00000483442 ZNF777Q9ULD5 760 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-217ENST00000483442 MADDQ8WXG6 1647 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 ARSDP51689 593 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 C11orf91Q3C1V1 193 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 MSL1Q68DK7 614 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 TXNRD3Q86VQ6 643 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 TRPM4Q8TD43 1214 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 MYO19Q96H55 970 aa6.11□□□□□ -1.43
LRCH3-217ENST00000483442 SPATA31D1Q6ZQQ2 1576 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 YEATS2Q9ULM3 1422 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 FOXO3O43524 673 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
LRCH3-217ENST00000483442 RARAP10276 462 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 RAC1P63000 192 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 FKBP5Q13451 457 aaPredicted RBP6.1□□□□□ -1.43
LRCH3-217ENST00000483442 COX20Q5RI15 118 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 PRIMPOLQ96LW4 560 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 RTCBQ9Y3I0 505 aaKnown RBP6.1□□□□□ -1.43
LRCH3-217ENST00000483442 BCORL1Q5H9F3 1711 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 CFAP43Q8NDM7 1665 aa6.1□□□□□ -1.43
LRCH3-217ENST00000483442 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-217ENST00000483442 UBAP1LF5GYI3 381 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 J3QW42 95 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 RFX1P22670 979 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 CAPN12Q6ZSI9 719 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 FAM200AQ8TCP9 573 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 TP53INP1Q96A56 240 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 SAP130Q9H0E3 1048 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 SMG9Q9H0W8 520 aaKnown RBP6.09□□□□□ -1.43
LRCH3-217ENST00000483442 FRRS1LQ9P0K9 344 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 USP21Q9UK80 565 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 KCNMB2Q9Y691 235 aa6.09□□□□□ -1.43
LRCH3-217ENST00000483442 UGGT2Q9NYU1 1516 aa6.09□□□□□ -1.44
LRCH3-217ENST00000483442 POGZQ7Z3K3 1410 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 RIMS1Q86UR5 1692 aaKnown RBP6.08□□□□□ -1.44
LRCH3-217ENST00000483442 SCO2A0A1W2PP80 73 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 H2AFB1P0C5Y9 115 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 EPB42P16452 691 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 NOS3P29474 1203 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 GPLD1P80108 840 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 ELMSAN1Q6PJG2 1045 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 FBXO11Q86XK2 927 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 TREML1Q86YW5 311 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms