RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CCDC151A5D8V7 595 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 IBSPP21815 317 aaPredicted RBP9.05□□□□□ -0.96
COL4A5-205ENST00000483338 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 HOMER1Q86YM7 354 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 FAM204AQ9H8W3 233 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 SYT1P21579 422 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 RBBP5Q15291 538 aaKnown RBP9.05□□□□□ -0.96
COL4A5-205ENST00000483338 BEND6Q5SZJ8 279 aaPredicted RBP9.05□□□□□ -0.96
COL4A5-205ENST00000483338 XAGE2Q96GT9 111 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 RGS12O14924 1447 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 STX6O43752 255 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 TUBB4AP04350 444 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 INPP5BP32019 993 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 PDE6BP35913 854 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 CCT5P48643 541 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 FNTAP49354 379 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 SF3A1Q15459 793 aaKnown RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 NFXL1Q6ZNB6 911 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 DRAXINQ8NBI3 349 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 OTUD7AQ8TE49 926 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 PUS7Q96PZ0 661 aaKnown RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 TNMDQ9H2S6 317 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 KDM4CQ9H3R0 1056 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 TTC21BQ7Z4L5 1316 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 PECAM1P16284 738 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 CLNS1AP54105 237 aaKnown RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 POTEDQ86YR6 584 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 ZNF232Q9UNY5 417 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 CAPN7Q9Y6W3 813 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 MED14O60244 1454 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 PYGLP06737 847 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 IQCB1Q15051 598 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 ARMCX6Q7L4S7 300 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 RABGGTAQ92696 567 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 IRX2Q9BZI1 471 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-205ENST00000483338 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 KIF13AQ9H1H9 1805 aa9.04□□□□□ -0.96
COL4A5-205ENST00000483338 A0A1B0GUA9 196 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 RBM43Q6ZSC3 357 aaKnown RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 HDXQ7Z353 690 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 YTHDC2Q9H6S0 1430 aaKnown RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 PPFIA2O75334 1257 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 IFIT2P09913 472 aaKnown RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 PEX19P40855 299 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 RAB27AP51159 221 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 BRD3Q15059 726 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 MSL3Q8N5Y2 521 aaKnown RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 C3orf20Q8ND61 904 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 FAM71BQ8TC56 605 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 DACT1Q9NYF0 836 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 POLR3AO14802 1390 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-205ENST00000483338 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 LMCD1Q9NZU5 365 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 MYOM1P52179 1685 aa9.03□□□□□ -0.96
COL4A5-205ENST00000483338 EIF3JO75822 258 aaKnown RBP9.02□□□□□ -0.97
COL4A5-205ENST00000483338 TXLNAP40222 546 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 PDCD2Q16342 344 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-205ENST00000483338 RPUSD2Q8IZ73 545 aaKnown RBP9.02□□□□□ -0.97
COL4A5-205ENST00000483338 HNRNPLLQ8WVV9 542 aaKnown RBP9.02□□□□□ -0.97
COL4A5-205ENST00000483338 ATP6V1DQ9Y5K8 247 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 EBAG9O00559 213 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 GSDMDP57764 484 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 ARMCX5Q6P1M9 558 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-205ENST00000483338 ACBD3Q9H3P7 528 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 L1RE1Q9UN81 338 aa9.02□□□□□ -0.97
COL4A5-205ENST00000483338 ABCD1P33897 745 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 PPP2R3AQ06190 1150 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 ACTN3Q08043 901 aaPredicted RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 IDI1Q13907 227 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 TLDC1Q6P9B6 456 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 TTC6Q86TZ1 520 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 AMOTL1Q8IY63 956 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 DDX20Q9UHI6 824 aaKnown RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 GOLGA6L19H0YKK7 550 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 NAP1L1P55209 391 aaKnown RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 MYSM1Q5VVJ2 828 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 SPDYE1Q8NFV5 336 aaPredicted RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 ENO4A6NNW6 628 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 KCNJ6P48051 423 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 C11orf57Q6ZUT1 292 aaPredicted RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 THUMPD2Q9BTF0 503 aaKnown RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 SUDS3Q9H7L9 328 aaPredicted RBP9.01□□□□□ -0.97
COL4A5-205ENST00000483338 ANAPC4Q9UJX5 808 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
COL4A5-205ENST00000483338 NAA25Q14CX7 972 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 HSP90B2PQ58FF3 399 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 UTP14AQ9BVJ6 771 aaKnown RBP9□□□□□ -0.97
COL4A5-205ENST00000483338 PICK1Q9NRD5 415 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
COL4A5-205ENST00000483338 MRFAP1Q9Y605 127 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms