RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 H3BQV1 296 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 SLC27A2O14975 620 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 CCAR1Q8IX12 1150 aaKnown RBP12.89□□□□□ -0.35
RPGR-208ENST00000482855 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 ADCY9O60503 1353 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 ABCA3Q99758 1704 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
RPGR-208ENST00000482855 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
RPGR-208ENST00000482855 MNS1Q8NEH6 495 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 PXDNQ92626 1479 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
RPGR-208ENST00000482855 ECHDC1Q9NTX5 307 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 JCADQ9P266 1359 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 ATP8B1O43520 1251 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 SFPQP23246 707 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPGR-208ENST00000482855 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 IRX3P78415 501 aaPredicted RBP12.89□□□□□ -0.35
RPGR-208ENST00000482855 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
RPGR-208ENST00000482855 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 BRF1Q92994 677 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
RPGR-208ENST00000482855 SPATA31A6Q5VVP1 1343 aa12.88□□□□□ -0.35
RPGR-208ENST00000482855 KCNJ6P48051 423 aa12.88□□□□□ -0.35
RPGR-208ENST00000482855 TOB2Q14106 344 aaPredicted RBP12.88□□□□□ -0.35
RPGR-208ENST00000482855 SMARCE1Q969G3 411 aa12.88□□□□□ -0.35
RPGR-208ENST00000482855 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
RPGR-208ENST00000482855 A0A087WWV3 80 aa12.88□□□□□ -0.35
RPGR-208ENST00000482855 TPM1P09493 284 aa12.88□□□□□ -0.35
RPGR-208ENST00000482855 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
RPGR-208ENST00000482855 DHX8Q14562 1220 aaKnown RBP12.88□□□□□ -0.35
RPGR-208ENST00000482855 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
RPGR-208ENST00000482855 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
RPGR-208ENST00000482855 MAP3K19Q56UN5 1328 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 PHLPP2Q6ZVD8 1323 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 HIP1O00291 1037 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 JAK2O60674 1132 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 ATF3P18847 181 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 ST5P78524 1137 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 SRRTQ9BXP5 876 aaKnown RBP12.87□□□□□ -0.35
RPGR-208ENST00000482855 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 CCP110O43303 1012 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 SMC2O95347 1197 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 OAS2P29728 719 aaKnown RBP12.87□□□□□ -0.35
RPGR-208ENST00000482855 ETF1P62495 437 aaKnown RBP12.87□□□□□ -0.35
RPGR-208ENST00000482855 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
RPGR-208ENST00000482855 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
RPGR-208ENST00000482855 NMIQ13287 307 aaPredicted RBP12.86□□□□□ -0.35
RPGR-208ENST00000482855 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
RPGR-208ENST00000482855 PEAK1Q9H792 1746 aa12.86□□□□□ -0.35
RPGR-208ENST00000482855 SEC31AO94979 1220 aaKnown RBP12.86□□□□□ -0.35
RPGR-208ENST00000482855 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
RPGR-208ENST00000482855 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 TADA3O75528 432 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
RPGR-208ENST00000482855 NWD2Q9ULI1 1742 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
RPGR-208ENST00000482855 NFATC2IPQ8NCF5 419 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 AK7Q96M32 723 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
RPGR-208ENST00000482855 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
RPGR-208ENST00000482855 MYO1CO00159 1063 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
RPGR-208ENST00000482855 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
RPGR-208ENST00000482855 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
RPGR-208ENST00000482855 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
RPGR-208ENST00000482855 HMG20BQ9P0W2 317 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 SBNO1A3KN83 1393 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 TBC1D8O95759 1140 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
RPGR-208ENST00000482855 EVCP57679 992 aa12.84□□□□□ -0.35
RPGR-208ENST00000482855 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
RPGR-208ENST00000482855 FSIP1Q8NA03 581 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms