RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 TRPA1O75762 1119 aa16.7■□□□□ 0.26
TMEM54-206ENST00000482771 VIL1P09327 827 aaKnown RBP16.7■□□□□ 0.26
TMEM54-206ENST00000482771 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
TMEM54-206ENST00000482771 RNF186Q9NXI6 227 aa16.7■□□□□ 0.26
TMEM54-206ENST00000482771 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
TMEM54-206ENST00000482771 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
TMEM54-206ENST00000482771 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
TMEM54-206ENST00000482771 RTL9Q8NET4 1388 aa16.69■□□□□ 0.26
TMEM54-206ENST00000482771 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
TMEM54-206ENST00000482771 RALBP1Q15311 655 aa16.69■□□□□ 0.26
TMEM54-206ENST00000482771 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
TMEM54-206ENST00000482771 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
TMEM54-206ENST00000482771 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
TMEM54-206ENST00000482771 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
TMEM54-206ENST00000482771 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
TMEM54-206ENST00000482771 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
TMEM54-206ENST00000482771 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
TMEM54-206ENST00000482771 LAMB2P55268 1798 aa16.68■□□□□ 0.26
TMEM54-206ENST00000482771 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
TMEM54-206ENST00000482771 ASTN2O75129 1339 aaPredicted RBP16.68■□□□□ 0.26
TMEM54-206ENST00000482771 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
TMEM54-206ENST00000482771 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
TMEM54-206ENST00000482771 DUOX1Q9NRD9 1551 aa16.67■□□□□ 0.26
TMEM54-206ENST00000482771 HOXB7P09629 217 aa16.66■□□□□ 0.26
TMEM54-206ENST00000482771 SCARF1Q14162 830 aa16.66■□□□□ 0.26
TMEM54-206ENST00000482771 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
TMEM54-206ENST00000482771 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
TMEM54-206ENST00000482771 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
TMEM54-206ENST00000482771 UFL1O94874 794 aa16.65■□□□□ 0.26
TMEM54-206ENST00000482771 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
TMEM54-206ENST00000482771 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
TMEM54-206ENST00000482771 CDCA5Q96FF9 252 aa16.65■□□□□ 0.26
TMEM54-206ENST00000482771 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
TMEM54-206ENST00000482771 SLC10A3P09131 477 aa16.64■□□□□ 0.25
TMEM54-206ENST00000482771 SOX10P56693 466 aa16.64■□□□□ 0.25
TMEM54-206ENST00000482771 ZNF280AP59817 542 aaPredicted RBP16.64■□□□□ 0.25
TMEM54-206ENST00000482771 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
TMEM54-206ENST00000482771 RSBN1LQ6PCB5 846 aaPredicted RBP16.64■□□□□ 0.25
TMEM54-206ENST00000482771 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.25
TMEM54-206ENST00000482771 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
TMEM54-206ENST00000482771 AGBL3Q8NEM8 1001 aa16.63■□□□□ 0.25
TMEM54-206ENST00000482771 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
TMEM54-206ENST00000482771 ADAMTS8Q9UP79 889 aa16.63■□□□□ 0.25
TMEM54-206ENST00000482771 ELL2O00472 640 aaPredicted RBP16.62■□□□□ 0.25
TMEM54-206ENST00000482771 USP17L8P0C7I0 530 aa16.62■□□□□ 0.25
TMEM54-206ENST00000482771 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
TMEM54-206ENST00000482771 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
TMEM54-206ENST00000482771 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
TMEM54-206ENST00000482771 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
TMEM54-206ENST00000482771 MYD88Q99836 296 aa16.62■□□□□ 0.25
TMEM54-206ENST00000482771 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
TMEM54-206ENST00000482771 PDE8AO60658 829 aa16.61■□□□□ 0.25
TMEM54-206ENST00000482771 CTU1Q7Z7A3 348 aaKnown RBP16.61■□□□□ 0.25
TMEM54-206ENST00000482771 MYOZ2Q9NPC6 264 aa16.61■□□□□ 0.25
TMEM54-206ENST00000482771 SCAF8Q9UPN6 1271 aaKnown RBP16.61■□□□□ 0.25
TMEM54-206ENST00000482771 COL4A1P02462 1669 aa16.61■□□□□ 0.25
TMEM54-206ENST00000482771 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
TMEM54-206ENST00000482771 PCCAP05165 728 aaPredicted RBP16.6■□□□□ 0.25
TMEM54-206ENST00000482771 MOB2Q70IA6 237 aa16.6■□□□□ 0.25
TMEM54-206ENST00000482771 RASAL3Q86YV0 1011 aa16.6■□□□□ 0.25
TMEM54-206ENST00000482771 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
TMEM54-206ENST00000482771 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
TMEM54-206ENST00000482771 GMLQ99445 158 aa16.6■□□□□ 0.25
TMEM54-206ENST00000482771 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
TMEM54-206ENST00000482771 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
TMEM54-206ENST00000482771 ATP2B4P23634 1241 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 FKBP1BP68106 108 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
TMEM54-206ENST00000482771 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
TMEM54-206ENST00000482771 PCDH10Q9P2E7 1040 aa16.59■□□□□ 0.25
TMEM54-206ENST00000482771 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
TMEM54-206ENST00000482771 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
TMEM54-206ENST00000482771 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
TMEM54-206ENST00000482771 XDHP47989 1333 aa16.58■□□□□ 0.24
TMEM54-206ENST00000482771 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
TMEM54-206ENST00000482771 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
TMEM54-206ENST00000482771 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
TMEM54-206ENST00000482771 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
TMEM54-206ENST00000482771 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
TMEM54-206ENST00000482771 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
TMEM54-206ENST00000482771 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
TMEM54-206ENST00000482771 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
TMEM54-206ENST00000482771 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
TMEM54-206ENST00000482771 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
TMEM54-206ENST00000482771 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
TMEM54-206ENST00000482771 ZNF296Q8WUU4 475 aaPredicted RBP16.55■□□□□ 0.24
TMEM54-206ENST00000482771 MINPP1Q9UNW1 487 aa16.55■□□□□ 0.24
TMEM54-206ENST00000482771 HPS5Q9UPZ3 1129 aa16.55■□□□□ 0.24
TMEM54-206ENST00000482771 APAF1O14727 1248 aa16.54■□□□□ 0.24
TMEM54-206ENST00000482771 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
TMEM54-206ENST00000482771 TM4SF4P48230 202 aa16.54■□□□□ 0.24
TMEM54-206ENST00000482771 GNAI1P63096 354 aa16.54■□□□□ 0.24
TMEM54-206ENST00000482771 PKN2Q16513 984 aaKnown RBP16.54■□□□□ 0.24
TMEM54-206ENST00000482771 OGFOD1Q8N543 542 aa16.54■□□□□ 0.24
TMEM54-206ENST00000482771 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms