RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 F6X3S4 739 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 H7C1D1 291 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 ATP2B4P23634 1241 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 DOK7Q18PE1 504 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 MPHOSPH8Q99549 860 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 DUOX1Q9NRD9 1551 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 CACNA1FO60840 1977 aa25.25■■□□□ 1.63
MSH5-215ENST00000482280 RTL9Q8NET4 1388 aa25.24■■□□□ 1.63
MSH5-215ENST00000482280 TMEM88BA6NKF7 163 aa25.24■■□□□ 1.63
MSH5-215ENST00000482280 SLC4A10Q6U841 1118 aa25.24■■□□□ 1.63
MSH5-215ENST00000482280 BSDC1Q9NW68 430 aaPredicted RBP25.24■■□□□ 1.63
MSH5-215ENST00000482280 PASKQ96RG2 1323 aa25.23■■□□□ 1.63
MSH5-215ENST00000482280 YDJCA8MPS7 323 aa25.23■■□□□ 1.63
MSH5-215ENST00000482280 PLA2G12BQ9BX93 195 aa25.23■■□□□ 1.63
MSH5-215ENST00000482280 C9orf78Q9NZ63 289 aaPredicted RBP25.23■■□□□ 1.63
MSH5-215ENST00000482280 CHMP3Q9Y3E7 222 aa25.23■■□□□ 1.63
MSH5-215ENST00000482280 ITGBL1O95965 494 aaPredicted RBP25.22■■□□□ 1.63
MSH5-215ENST00000482280 GPR101Q96P66 508 aaPredicted RBP25.22■■□□□ 1.63
MSH5-215ENST00000482280 CNOT7Q9UIV1 285 aaKnown RBP25.22■■□□□ 1.63
MSH5-215ENST00000482280 ITGA6P23229 1130 aa25.21■■□□□ 1.63
MSH5-215ENST00000482280 RPS12P25398 132 aaKnown RBP25.21■■□□□ 1.63
MSH5-215ENST00000482280 BEND3Q5T5X7 828 aa25.21■■□□□ 1.63
MSH5-215ENST00000482280 JMYQ8N9B5 988 aa25.21■■□□□ 1.63
MSH5-215ENST00000482280 ANKRD18BA2A2Z9 1011 aa25.2■■□□□ 1.62
MSH5-215ENST00000482280 PSMD14O00487 310 aa25.2■■□□□ 1.62
MSH5-215ENST00000482280 SRCIN1Q9C0H9 1055 aa25.2■■□□□ 1.62
MSH5-215ENST00000482280 ALDH1L1O75891 902 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 FAM161AQ3B820 660 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 MICALL2Q8IY33 904 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 DPF2Q92785 391 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 ANKRD2Q9GZV1 360 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 MKRN1Q9UHC7 482 aaKnown RBP25.19■■□□□ 1.62
MSH5-215ENST00000482280 MINPP1Q9UNW1 487 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 ZBTB12Q9Y330 459 aaPredicted RBP25.19■■□□□ 1.62
MSH5-215ENST00000482280 COL4A1P02462 1669 aa25.19■■□□□ 1.62
MSH5-215ENST00000482280 GRM8O00222 908 aa25.18■■□□□ 1.62
MSH5-215ENST00000482280 KCNJ4P48050 445 aa25.18■■□□□ 1.62
MSH5-215ENST00000482280 IFIT5Q13325 482 aaKnown RBP25.18■■□□□ 1.62
MSH5-215ENST00000482280 TAF7LQ5H9L4 462 aa25.18■■□□□ 1.62
MSH5-215ENST00000482280 ABT1Q9ULW3 272 aaKnown RBP25.18■■□□□ 1.62
MSH5-215ENST00000482280 ADAMTSL1Q8N6G6 1762 aa25.18■■□□□ 1.62
MSH5-215ENST00000482280 LTBP1Q14766 1721 aa25.17■■□□□ 1.62
MSH5-215ENST00000482280 CASP7P55210 303 aa25.17■■□□□ 1.62
MSH5-215ENST00000482280 SLFN5Q08AF3 891 aa25.17■■□□□ 1.62
MSH5-215ENST00000482280 ZC3H15Q8WU90 426 aaKnown RBP25.17■■□□□ 1.62
MSH5-215ENST00000482280 MYH3P11055 1940 aa25.17■■□□□ 1.62
MSH5-215ENST00000482280 CSF1RP07333 972 aa25.16■■□□□ 1.62
MSH5-215ENST00000482280 PTPRCP08575 1304 aa25.15■■□□□ 1.62
MSH5-215ENST00000482280 CCT4P50991 539 aaKnown RBP25.15■■□□□ 1.62
MSH5-215ENST00000482280 CCDC57Q2TAC2 916 aa25.15■■□□□ 1.62
MSH5-215ENST00000482280 PODNQ7Z5L7 613 aa25.15■■□□□ 1.62
MSH5-215ENST00000482280 LEMD3Q9Y2U8 911 aa25.15■■□□□ 1.62
MSH5-215ENST00000482280 MED23Q9ULK4 1368 aa25.14■■□□□ 1.61
MSH5-215ENST00000482280 VIL1P09327 827 aaKnown RBP25.12■■□□□ 1.61
MSH5-215ENST00000482280 RBM26Q5T8P6 1007 aaKnown RBP25.12■■□□□ 1.61
MSH5-215ENST00000482280 LMBR1LQ6UX01 489 aa25.12■■□□□ 1.61
MSH5-215ENST00000482280 MRPL50Q8N5N7 158 aaKnown RBP25.12■■□□□ 1.61
MSH5-215ENST00000482280 FBXW7Q969H0 707 aa25.12■■□□□ 1.61
MSH5-215ENST00000482280 KCNQ5Q9NR82 932 aa25.12■■□□□ 1.61
MSH5-215ENST00000482280 CNTNAP1P78357 1384 aa25.12■■□□□ 1.61
MSH5-215ENST00000482280 USP17L3A6NCW0 530 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 USP17L4A6NCW7 530 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 FOXO4P98177 505 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 DEFB115Q30KQ5 88 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 TBC1D10BQ4KMP7 808 aaPredicted RBP25.11■■□□□ 1.61
MSH5-215ENST00000482280 PAXIP1Q6ZW49 1069 aaPredicted RBP25.11■■□□□ 1.61
MSH5-215ENST00000482280 CDC37L1Q7L3B6 337 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 USP17L1Q7RTZ2 530 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 TRPM4Q8TD43 1214 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 SMC4Q9NTJ3 1288 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 ZNF804BA4D1E1 1349 aa25.11■■□□□ 1.61
MSH5-215ENST00000482280 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
MSH5-215ENST00000482280 RSBN1LQ6PCB5 846 aaPredicted RBP25.1■■□□□ 1.61
MSH5-215ENST00000482280 SAMD7Q7Z3H4 446 aa25.1■■□□□ 1.61
MSH5-215ENST00000482280 AGBL3Q8NEM8 1001 aa25.1■■□□□ 1.61
MSH5-215ENST00000482280 SSH1Q8WYL5 1049 aa25.1■■□□□ 1.61
MSH5-215ENST00000482280 DCPSQ96C86 337 aaKnown RBP25.1■■□□□ 1.61
MSH5-215ENST00000482280 CDCA7LQ96GN5 454 aa25.1■■□□□ 1.61
MSH5-215ENST00000482280 COA1Q9GZY4 146 aa25.1■■□□□ 1.61
MSH5-215ENST00000482280 TRAF5O00463 557 aa25.09■■□□□ 1.61
MSH5-215ENST00000482280 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
MSH5-215ENST00000482280 CHRNDQ07001 517 aa25.09■■□□□ 1.61
MSH5-215ENST00000482280 SPEF2Q9C093 1822 aa25.08■■□□□ 1.61
MSH5-215ENST00000482280 SHTN1A0MZ66 631 aa25.08■■□□□ 1.61
MSH5-215ENST00000482280 KIF4BQ2VIQ3 1234 aa25.08■■□□□ 1.61
MSH5-215ENST00000482280 GLIS2Q9BZE0 524 aaPredicted RBP25.08■■□□□ 1.61
MSH5-215ENST00000482280 ZNF408Q9H9D4 720 aa25.08■■□□□ 1.61
MSH5-215ENST00000482280 CNNM1Q9NRU3 951 aa25.08■■□□□ 1.61
MSH5-215ENST00000482280 PGAP2Q9UHJ9 254 aa25.08■■□□□ 1.61
MSH5-215ENST00000482280 HSPA1AP0DMV8 641 aaKnown RBP25.07■■□□□ 1.6
MSH5-215ENST00000482280 HSPA1BP0DMV9 641 aaKnown RBP25.07■■□□□ 1.6
MSH5-215ENST00000482280 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
MSH5-215ENST00000482280 LDHAL6AQ6ZMR3 332 aa25.07■■□□□ 1.6
MSH5-215ENST00000482280 RASSF10A6NK89 507 aa25.06■■□□□ 1.6
MSH5-215ENST00000482280 CELF2O95319 508 aaKnown RBP25.06■■□□□ 1.6
MSH5-215ENST00000482280 USP17L8P0C7I0 530 aa25.06■■□□□ 1.6
MSH5-215ENST00000482280 DIEXFQ68CQ4 756 aaKnown RBP25.06■■□□□ 1.6
MSH5-215ENST00000482280 OGFOD1Q8N543 542 aa25.06■■□□□ 1.6
MSH5-215ENST00000482280 ECE1P42892 770 aa25.05■■□□□ 1.6
MSH5-215ENST00000482280 VEGFBP49765 207 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms