RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 RCAN3Q9UKA8 241 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 AKAP2Q9Y2D5 859 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 ATP6V0A2Q9Y487 856 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 LAMA4Q16363 1823 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 XDHP47989 1333 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 HNRNPUQ00839 825 aaKnown RBP eCLIP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 DDR1Q08345 913 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 HDAC1Q13547 482 aaPredicted RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 MVPQ14764 893 aaKnown RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 LRRFIP1Q32MZ4 808 aaKnown RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 CCDC184Q52MB2 194 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 USPL1Q5W0Q7 1092 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 DZIP1LQ8IYY4 767 aaKnown RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 ZGPATQ8N5A5 531 aaKnown RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 TTLL6Q8N841 843 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 MTMR14Q8NCE2 650 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 C7orf43Q8WVR3 580 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 TBC1D2Q9BYX2 928 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 MAF1Q9H063 256 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 NIP7Q9Y221 180 aaKnown RBP eCLIP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 PPP2R3BQ9Y5P8 575 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 SLX4Q8IY92 1834 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 UBN2Q6ZU65 1347 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 FAM205AQ6ZU69 1335 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 TRPM7Q96QT4 1865 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 SEC24BO95487 1268 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 GNAI2P04899 355 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 MMP10P09238 476 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 IL15P40933 162 aaPredicted RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 SLC39A6Q13433 755 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 DALRD3Q5D0E6 543 aaKnown RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 DDX46Q7L014 1031 aaKnown RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 DEFB132Q7Z7B7 95 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 SSH3Q8TE77 659 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 TBC1D22AQ8WUA7 517 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 SSH1Q8WYL5 1049 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 GCC1Q96CN9 775 aa3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 BMP2KQ9NSY1 1161 aaPredicted RBP3.39□□□□□ -1.87
RAB3IP-206ENST00000481897 ANKRD18BA2A2Z9 1011 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 PTCD1O75127 700 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 CENPBP07199 599 aaPredicted RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 FKBP5Q13451 457 aaPredicted RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 FKBP1CQ5VVH2 108 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 TBC1D9BQ66K14 1250 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 TEX2Q8IWB9 1127 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 RPGRQ92834 1020 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 HOOK2Q96ED9 719 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 PHF12Q96QT6 1004 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 MAP3K2Q9Y2U5 619 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 ZNF804BA4D1E1 1349 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 IRS2Q9Y4H2 1338 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 KCNQ3O43525 872 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 A1BGP04217 495 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 IGHMBP2P38935 993 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 RRP1P56182 461 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 DCTN1Q14203 1278 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 SLF2Q8IX21 1173 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 AGBL3Q8NEM8 1001 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 COA1Q9GZY4 146 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 ZMYM6O95789 1325 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 PI4KAP2A4QPH2 592 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 IRS4O14654 1257 aaPredicted RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 PPEF1O14829 653 aaPredicted RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 IGKV5-2P06315 115 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 UQCRFS1P1P0C7P4 283 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 UBTFL1P0CB47 393 aaPredicted RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 CANXP27824 592 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 ATP8B2P98198 1209 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 FKBP8Q14318 412 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 R3HDM1Q15032 1099 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 PODNQ7Z5L7 613 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 C2CD5Q86YS7 1000 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 ANKRD18AQ8IVF6 992 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 ANKRD44Q8N8A2 993 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 PI4KAP1Q8N8J0 262 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 ZC3H15Q8WU90 426 aaKnown RBP3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 DPF2Q92785 391 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 SYNPO2Q9UMS6 1093 aa3.38□□□□□ -1.87
RAB3IP-206ENST00000481897 TTC41PQ6P2S7 1318 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 LMNB1P20700 586 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 FOXO4P98177 505 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 KIAA2012Q0VF49 1180 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 TNIP1Q15025 636 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 SUSD4Q5VX71 490 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 HHIPL1Q96JK4 782 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 TRMT112Q9UI30 125 aaKnown RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 ARIH1Q9Y4X5 557 aaPredicted RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 KDM2BQ8NHM5 1336 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 AK9Q5TCS8 1911 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 IQCA1LA6NCM1 817 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 TRIM27P14373 513 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 IL1R1P14778 569 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 KCNA3P22001 575 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 NUBP1P53384 320 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 FSTL1Q12841 308 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 IFIT5Q13325 482 aaKnown RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 PPP4R3BQ5MIZ7 849 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 SPTY2D1Q68D10 685 aaPredicted RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 TTLL7Q6ZT98 887 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms