RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 GLTPD2A6NH11 291 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 HSPA8P11142 646 aaKnown RBP11.89□□□□□ -0.51
HLA-B-253ENST00000481849 PPP4CP60510 307 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 KCNC4Q03721 635 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 NIP7Q9Y221 180 aaKnown RBP eCLIP11.89□□□□□ -0.51
HLA-B-253ENST00000481849 SCN7AQ01118 1682 aa11.89□□□□□ -0.51
HLA-B-253ENST00000481849 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 SRGNP10124 158 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 OSBPP22059 807 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 NFE2L2Q16236 605 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 HLFQ16534 295 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 ERFEQ4G0M1 354 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 STYK1Q6J9G0 422 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
HLA-B-253ENST00000481849 MASTLQ96GX5 879 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 PLEKHF1Q96S99 279 aa11.88□□□□□ -0.51
HLA-B-253ENST00000481849 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
HLA-B-253ENST00000481849 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
HLA-B-253ENST00000481849 MYL6BP14649 208 aa11.87□□□□□ -0.51
HLA-B-253ENST00000481849 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
HLA-B-253ENST00000481849 CLEC4GQ6UXB4 293 aa11.87□□□□□ -0.51
HLA-B-253ENST00000481849 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
HLA-B-253ENST00000481849 TATDN2Q93075 761 aa11.87□□□□□ -0.51
HLA-B-253ENST00000481849 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
HLA-B-253ENST00000481849 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
HLA-B-253ENST00000481849 GTF2E1P29083 439 aaPredicted RBP11.86□□□□□ -0.51
HLA-B-253ENST00000481849 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
HLA-B-253ENST00000481849 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
HLA-B-253ENST00000481849 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
HLA-B-253ENST00000481849 OLFM4Q6UX06 510 aa11.85□□□□□ -0.51
HLA-B-253ENST00000481849 SAMD7Q7Z3H4 446 aa11.85□□□□□ -0.51
HLA-B-253ENST00000481849 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
HLA-B-253ENST00000481849 COL11A2P13942 1736 aaPredicted RBP11.84□□□□□ -0.51
HLA-B-253ENST00000481849 POTECB2RU33 542 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 DDNO94850 711 aaPredicted RBP11.84□□□□□ -0.51
HLA-B-253ENST00000481849 NPR1P16066 1061 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 FXR1P51114 621 aaKnown RBP eCLIP11.84□□□□□ -0.51
HLA-B-253ENST00000481849 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 ANKRD31Q8N7Z5 1873 aa11.84□□□□□ -0.51
HLA-B-253ENST00000481849 DLEC1Q9Y238 1755 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 GPTP24298 496 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 RIPK4P57078 832 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
HLA-B-253ENST00000481849 CCDC93Q567U6 631 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.52
HLA-B-253ENST00000481849 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 TNRC6CQ9HCJ0 1690 aaKnown RBP11.83□□□□□ -0.52
HLA-B-253ENST00000481849 MAP3K15Q6ZN16 1313 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 LTBP3Q9NS15 1303 aa11.83□□□□□ -0.52
HLA-B-253ENST00000481849 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
HLA-B-253ENST00000481849 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
HLA-B-253ENST00000481849 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
HLA-B-253ENST00000481849 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
HLA-B-253ENST00000481849 C7orf43Q8WVR3 580 aa11.82□□□□□ -0.52
HLA-B-253ENST00000481849 ZNF277Q9NRM2 450 aaPredicted RBP11.82□□□□□ -0.52
HLA-B-253ENST00000481849 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
HLA-B-253ENST00000481849 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
HLA-B-253ENST00000481849 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
HLA-B-253ENST00000481849 ANXA1P04083 346 aa11.81□□□□□ -0.52
HLA-B-253ENST00000481849 RALBP1Q15311 655 aa11.81□□□□□ -0.52
HLA-B-253ENST00000481849 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
HLA-B-253ENST00000481849 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
HLA-B-253ENST00000481849 TIAM2Q8IVF5 1701 aa11.8□□□□□ -0.52
HLA-B-253ENST00000481849 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
HLA-B-253ENST00000481849 TCERG1O14776 1098 aaKnown RBP11.8□□□□□ -0.52
HLA-B-253ENST00000481849 FKBP4Q02790 459 aaKnown RBP eCLIP11.8□□□□□ -0.52
HLA-B-253ENST00000481849 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
HLA-B-253ENST00000481849 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
HLA-B-253ENST00000481849 SBF1O95248 1867 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 RNF40O75150 1001 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 ALDH1B1P30837 517 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
HLA-B-253ENST00000481849 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 SLC51AQ86UW1 340 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
HLA-B-253ENST00000481849 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
HLA-B-253ENST00000481849 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
HLA-B-253ENST00000481849 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
HLA-B-253ENST00000481849 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
HLA-B-253ENST00000481849 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
HLA-B-253ENST00000481849 IARSP41252 1262 aaKnown RBP11.77□□□□□ -0.53
HLA-B-253ENST00000481849 LMOD3Q0VAK6 560 aa11.77□□□□□ -0.53
HLA-B-253ENST00000481849 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
HLA-B-253ENST00000481849 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
HLA-B-253ENST00000481849 KRT24Q2M2I5 525 aa11.77□□□□□ -0.53
HLA-B-253ENST00000481849 CRY2Q49AN0 593 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms