RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
TRIM27-205ENST00000481474 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 ARPP19P56211 112 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 UACAQ9BZF9 1416 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 OATP04181 439 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 BIRC3Q13489 604 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 MIA2Q96PC5 1412 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 GOLIM4O00461 696 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 ZC3H12CQ9C0D7 883 aaKnown RBP13.17□□□□□ -0.3
TRIM27-205ENST00000481474 GIPC1O14908 333 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 TMEM259Q4ZIN3 620 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 ADRA2BP18089 450 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 PDE4BQ07343 736 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 FAM180AQ6UWF9 173 aa13.17□□□□□ -0.3
TRIM27-205ENST00000481474 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
TRIM27-205ENST00000481474 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 FMNL3Q8IVF7 1028 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 UBA7P41226 1012 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 BRDTQ58F21 947 aaPredicted RBP13.16□□□□□ -0.3
TRIM27-205ENST00000481474 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 NOL3O60936 208 aaKnown RBP13.16□□□□□ -0.3
TRIM27-205ENST00000481474 IL1RL1Q01638 556 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
TRIM27-205ENST00000481474 SLC7A5P2Q9GIP4 190 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 SUFUQ9UMX1 484 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 TCP10Q12799 353 aa13.16□□□□□ -0.3
TRIM27-205ENST00000481474 SYNJ2BP-COX16A0A087WUM0 186 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 COX16Q9P0S2 106 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 PLCB4Q15147 1175 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 BLVRAP53004 296 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 SEPT8Q92599 483 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 KRT33BQ14525 404 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
TRIM27-205ENST00000481474 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
TRIM27-205ENST00000481474 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.31
TRIM27-205ENST00000481474 TRAK2O60296 914 aa13.15□□□□□ -0.31
TRIM27-205ENST00000481474 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.31
TRIM27-205ENST00000481474 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
TRIM27-205ENST00000481474 NUCB1Q02818 461 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
TRIM27-205ENST00000481474 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
TRIM27-205ENST00000481474 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 LMCD1Q9NZU5 365 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
TRIM27-205ENST00000481474 CDR2Q01850 454 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 PDE6AP16499 860 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
TRIM27-205ENST00000481474 CYP7A1P22680 504 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 VPS52Q8N1B4 723 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
TRIM27-205ENST00000481474 SLC8A3P57103 927 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 MTRQ99707 1265 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 NAP1L4Q99733 375 aaKnown RBP13.13□□□□□ -0.31
TRIM27-205ENST00000481474 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 SAT1P21673 171 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 LCA5Q86VQ0 697 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 INF2Q27J81 1249 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 UBXN4Q92575 508 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 B4DLN1 442 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
TRIM27-205ENST00000481474 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
TRIM27-205ENST00000481474 POMGNT1Q8WZA1 660 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
TRIM27-205ENST00000481474 C6orf50Q9HD87 102 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 TOM1O60784 492 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 NAPAP54920 295 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 ATICP31939 592 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 TNNI2P48788 182 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 MRE11P49959 708 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 SMC6Q96SB8 1091 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
TRIM27-205ENST00000481474 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
TRIM27-205ENST00000481474 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM27-205ENST00000481474 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms