RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 RIPOR2Q9Y4F9 1068 aa22.08■■□□□ 1.13
MRPL28-209ENST00000481453 RBM8AQ9Y5S9 174 aaKnown RBP22.08■■□□□ 1.13
MRPL28-209ENST00000481453 PRPF40AO75400 957 aaKnown RBP22.08■■□□□ 1.13
MRPL28-209ENST00000481453 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
MRPL28-209ENST00000481453 PRPF40BQ6NWY9 871 aaKnown RBP22.08■■□□□ 1.13
MRPL28-209ENST00000481453 DDX46Q7L014 1031 aaKnown RBP22.08■■□□□ 1.13
MRPL28-209ENST00000481453 ESPNB1AK53 854 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 CERKQ8TCT0 537 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 SPEF2Q9C093 1822 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 ADORA1P30542 326 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 ZNF445P59923 1031 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 NHSQ6T4R5 1651 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 DDX60Q8IY21 1712 aaKnown RBP22.07■■□□□ 1.12
MRPL28-209ENST00000481453 BTAF1O14981 1849 aa22.07■■□□□ 1.12
MRPL28-209ENST00000481453 ANKRD18BA2A2Z9 1011 aa22.06■■□□□ 1.12
MRPL28-209ENST00000481453 ADCK5Q3MIX3 580 aa22.06■■□□□ 1.12
MRPL28-209ENST00000481453 ZSCAN23Q3MJ62 389 aa22.06■■□□□ 1.12
MRPL28-209ENST00000481453 PAG1Q9NWQ8 432 aa22.06■■□□□ 1.12
MRPL28-209ENST00000481453 AKAP2Q9Y2D5 859 aa22.06■■□□□ 1.12
MRPL28-209ENST00000481453 TAF5LO75529 589 aa22.05■■□□□ 1.12
MRPL28-209ENST00000481453 CREB3L3Q68CJ9 461 aa22.05■■□□□ 1.12
MRPL28-209ENST00000481453 NOL8Q76FK4 1167 aaKnown RBP22.05■■□□□ 1.12
MRPL28-209ENST00000481453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.05■■□□□ 1.12
MRPL28-209ENST00000481453 ANP32BQ92688 251 aaKnown RBP22.05■■□□□ 1.12
MRPL28-209ENST00000481453 LAMB2P55268 1798 aa22.05■■□□□ 1.12
MRPL28-209ENST00000481453 GOLIM4O00461 696 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 CCDC173Q0VFZ6 552 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 VGLL2Q8N8G2 317 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 XAGE2Q96GT9 111 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 AK7Q96M32 723 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 KCNQ4P56696 695 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 LDHAL6AQ6ZMR3 332 aa22.04■■□□□ 1.12
MRPL28-209ENST00000481453 IFIT1P09914 478 aaKnown RBP22.03■■□□□ 1.12
MRPL28-209ENST00000481453 CPA1P15085 419 aa22.03■■□□□ 1.12
MRPL28-209ENST00000481453 FOXD4L5Q5VV16 416 aaPredicted RBP22.03■■□□□ 1.12
MRPL28-209ENST00000481453 FOXD4L4Q8WXT5 416 aaPredicted RBP22.03■■□□□ 1.12
MRPL28-209ENST00000481453 SEC62Q99442 399 aaKnown RBP22.03■■□□□ 1.12
MRPL28-209ENST00000481453 UTP14AQ9BVJ6 771 aaKnown RBP22.03■■□□□ 1.12
MRPL28-209ENST00000481453 TM6SF1Q9BZW5 370 aa22.03■■□□□ 1.12
MRPL28-209ENST00000481453 SLC27A2O14975 620 aa22.03■■□□□ 1.12
MRPL28-209ENST00000481453 NTSR2O95665 410 aa22.03■■□□□ 1.12
MRPL28-209ENST00000481453 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
MRPL28-209ENST00000481453 PARP10Q53GL7 1025 aa22.03■■□□□ 1.12
MRPL28-209ENST00000481453 RPAP1Q9BWH6 1393 aaPredicted RBP22.02■■□□□ 1.12
MRPL28-209ENST00000481453 CASTP20810 708 aaKnown RBP22.02■■□□□ 1.12
MRPL28-209ENST00000481453 HSPA1LP34931 641 aa22.02■■□□□ 1.12
MRPL28-209ENST00000481453 METTL24Q5JXM2 366 aa22.02■■□□□ 1.12
MRPL28-209ENST00000481453 GPT2Q8TD30 523 aa22.02■■□□□ 1.12
MRPL28-209ENST00000481453 JAKMIP1Q96N16 626 aaKnown RBP22.02■■□□□ 1.12
MRPL28-209ENST00000481453 ZSWIM6Q9HCJ5 1215 aa22.02■■□□□ 1.12
MRPL28-209ENST00000481453 CNTNAP4Q9C0A0 1308 aa22.02■■□□□ 1.12
MRPL28-209ENST00000481453 AK2P54819 239 aa22.02■■□□□ 1.11
MRPL28-209ENST00000481453 CCDC129Q6ZRS4 1044 aa22.02■■□□□ 1.11
MRPL28-209ENST00000481453 INTS4Q96HW7 963 aaKnown RBP22.02■■□□□ 1.11
MRPL28-209ENST00000481453 FAM177BA6PVY3 158 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 USPL1Q5W0Q7 1092 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 RUFY3Q7L099 469 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 TICAM2Q86XR7 235 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 CHAMP1Q96JM3 812 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 PPP1R9BQ96SB3 815 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 NIP7Q9Y221 180 aaKnown RBP eCLIP22.01■■□□□ 1.11
MRPL28-209ENST00000481453 SCN7AQ01118 1682 aa22.01■■□□□ 1.11
MRPL28-209ENST00000481453 ATP2B3Q16720 1220 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 SLFNL1Q499Z3 407 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 MCMDC2Q4G0Z9 681 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 FAM182BQ5T319 152 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 TAF6LQ9Y6J9 622 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 BRD1O95696 1058 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 KCNJ4P48050 445 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 COL9A3Q14050 684 aaPredicted RBP22■■□□□ 1.11
MRPL28-209ENST00000481453 SCARF1Q14162 830 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 GJD4Q96KN9 370 aaPredicted RBP22■■□□□ 1.11
MRPL28-209ENST00000481453 CNNM1Q9NRU3 951 aa22■■□□□ 1.11
MRPL28-209ENST00000481453 CCDC158Q5M9N0 1113 aa21.99■■□□□ 1.11
MRPL28-209ENST00000481453 TTC39AQ5SRH9 613 aa21.99■■□□□ 1.11
MRPL28-209ENST00000481453 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
MRPL28-209ENST00000481453 ZKSCAN1P17029 563 aaPredicted RBP21.99■■□□□ 1.11
MRPL28-209ENST00000481453 ZMYM1Q5SVZ6 1142 aa21.99■■□□□ 1.11
MRPL28-209ENST00000481453 RBM27Q9P2N5 1060 aaKnown RBP21.99■■□□□ 1.11
MRPL28-209ENST00000481453 AFF2P51816 1311 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 ATRNO75882 1429 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 SBF2Q86WG5 1849 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 ARAP2Q8WZ64 1704 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 GORABQ5T7V8 394 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
MRPL28-209ENST00000481453 VPS53Q5VIR6 699 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 CLEC4GQ6UXB4 293 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 NAP1L5Q96NT1 182 aaPredicted RBP21.98■■□□□ 1.11
MRPL28-209ENST00000481453 HELLSQ9NRZ9 838 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 AKAP11Q9UKA4 1901 aa21.98■■□□□ 1.11
MRPL28-209ENST00000481453 TSGA10IPQ3SY00 556 aa21.97■■□□□ 1.11
MRPL28-209ENST00000481453 ZNF652Q9Y2D9 606 aa21.97■■□□□ 1.11
MRPL28-209ENST00000481453 CYP46A1Q9Y6A2 500 aa21.97■■□□□ 1.11
MRPL28-209ENST00000481453 RTL9Q8NET4 1388 aa21.97■■□□□ 1.11
MRPL28-209ENST00000481453 LY75O60449 1722 aa21.97■■□□□ 1.11
MRPL28-209ENST00000481453 PDE8BO95263 885 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
MRPL28-209ENST00000481453 PDRG1Q9NUG6 133 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms