RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 FBLN1P23142 703 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 RTN1Q16799 776 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 CCDC102BQ68D86 513 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 ZSCAN30Q86W11 494 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 RTL9Q8NET4 1388 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
GARNL3-216ENST00000481242 CCT2P78371 535 aaKnown RBP10.88□□□□□ -0.67
GARNL3-216ENST00000481242 FILIP1Q7Z7B0 1213 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 SUPT20HQ8NEM7 779 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 NEMFO60524 1076 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 SLC26A6Q9BXS9 759 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 MAGI2Q86UL8 1455 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 COL17A1Q9UMD9 1497 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-216ENST00000481242 KLF18A0A0U1RQI7 1052 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 EIF3JO75822 258 aaKnown RBP10.88□□□□□ -0.67
GARNL3-216ENST00000481242 HAND2P61296 217 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 CCDC172P0C7W6 258 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 NAP1L4Q99733 375 aaKnown RBP10.88□□□□□ -0.67
GARNL3-216ENST00000481242 DCTPP1Q9H773 170 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
GARNL3-216ENST00000481242 RNF113AO15541 343 aaKnown RBP10.87□□□□□ -0.67
GARNL3-216ENST00000481242 USO1O60763 962 aaKnown RBP10.87□□□□□ -0.67
GARNL3-216ENST00000481242 TBCAO75347 108 aaKnown RBP10.87□□□□□ -0.67
GARNL3-216ENST00000481242 TERF1P54274 439 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 KCNA4P22459 653 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 C6orf50Q9HD87 102 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 IDEP14735 1019 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 BAG6P46379 1132 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 KCNG4Q8TDN1 519 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 IPO4Q8TEX9 1081 aaKnown RBP10.87□□□□□ -0.67
GARNL3-216ENST00000481242 BRF1Q92994 677 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 GBP3Q9H0R5 595 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 SAMM50Q9Y512 469 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 GJB2P29033 226 aa10.87□□□□□ -0.67
GARNL3-216ENST00000481242 C16orf71Q8IYS4 520 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-216ENST00000481242 UQCRHLA0A096LP55 91 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 PDE8AO60658 829 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 YEATS4O95619 227 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 IGHDP01880 384 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 UQCRHP07919 91 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 SDSP20132 328 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 ORAI2Q96SN7 254 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
GARNL3-216ENST00000481242 TOP1P11387 765 aaKnown RBP10.86□□□□□ -0.67
GARNL3-216ENST00000481242 ESYT1Q9BSJ8 1104 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 METTL22Q9BUU2 404 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-216ENST00000481242 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 EZRP15311 586 aaKnown RBP10.86□□□□□ -0.67
GARNL3-216ENST00000481242 GNA11P29992 359 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 GUCY1B3Q02153 619 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 KLHL10Q6JEL2 608 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 EYA2O00167 538 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 SPAG1Q07617 926 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
GARNL3-216ENST00000481242 GSDMDP57764 484 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 GLT8D2Q9H1C3 349 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 SLC52A2Q9HAB3 445 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 PER1O15534 1290 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-216ENST00000481242 MTIF2P46199 727 aaKnown RBP10.85□□□□□ -0.67
GARNL3-216ENST00000481242 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 CCDC40Q4G0X9 1142 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 SYCP3Q8IZU3 236 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-216ENST00000481242 IL13P35225 146 aa10.85□□□□□ -0.67
GARNL3-216ENST00000481242 SSR1P43307 286 aaKnown RBP10.85□□□□□ -0.67
GARNL3-216ENST00000481242 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 STX1AQ16623 288 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 MCM9Q9NXL9 1143 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 UBE2HP62256 183 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 TNPO1Q92973 898 aaKnown RBP10.84□□□□□ -0.67
GARNL3-216ENST00000481242 ALG1Q9BT22 464 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 USP21Q9UK80 565 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 SPDYE3A6NKU9 549 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 KIF5CO60282 957 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 MCM3P25205 808 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 PUM3Q15397 648 aaKnown RBP10.84□□□□□ -0.67
GARNL3-216ENST00000481242 CEP85Q6P2H3 762 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 RRP36Q96EU6 259 aaKnown RBP10.84□□□□□ -0.67
GARNL3-216ENST00000481242 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 PZPP20742 1482 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 GOLGA6L9A6NEM1 432 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 NCBP1Q09161 790 aaKnown RBP10.84□□□□□ -0.67
GARNL3-216ENST00000481242 PHACTR3Q96KR7 559 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 HELLSQ9NRZ9 838 aa10.84□□□□□ -0.67
GARNL3-216ENST00000481242 H0YIN7 160 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 CHL1O00533 1208 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 GBP2P32456 591 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 GGA1Q9UJY5 639 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 SBNO2Q9Y2G9 1366 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms