RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 LPIN2Q92539 896 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 AFF2P51816 1311 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 PNMA6EA0A0J9YXQ4 647 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 TXLNAP40222 546 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 STK11IPQ8N1F8 1099 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 CFAP45Q9UL16 551 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 HCLS1P14317 486 aaPredicted RBP22.64■■□□□ 1.22
CCM2-214ENST00000481194 MFSD6Q6ZSS7 791 aa22.64■■□□□ 1.22
CCM2-214ENST00000481194 CERS3Q8IU89 383 aa22.64■■□□□ 1.22
CCM2-214ENST00000481194 ZC3H12CQ9C0D7 883 aaKnown RBP22.64■■□□□ 1.22
CCM2-214ENST00000481194 NMIQ13287 307 aaPredicted RBP22.64■■□□□ 1.21
CCM2-214ENST00000481194 IQSEC2Q5JU85 1478 aa22.64■■□□□ 1.21
CCM2-214ENST00000481194 SLC9C2Q5TAH2 1124 aa22.64■■□□□ 1.21
CCM2-214ENST00000481194 SLC12A7Q9Y666 1083 aa22.64■■□□□ 1.21
CCM2-214ENST00000481194 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
CCM2-214ENST00000481194 PALLDQ8WX93 1383 aa22.64■■□□□ 1.21
CCM2-214ENST00000481194 C8orf34Q49A92 452 aa22.63■■□□□ 1.21
CCM2-214ENST00000481194 SEPT12Q8IYM1 358 aa22.63■■□□□ 1.21
CCM2-214ENST00000481194 CTCFLQ8NI51 663 aaPredicted RBP22.63■■□□□ 1.21
CCM2-214ENST00000481194 UPF3BQ9BZI7 483 aaKnown RBP22.63■■□□□ 1.21
CCM2-214ENST00000481194 EPB41L2O43491 1005 aaKnown RBP22.63■■□□□ 1.21
CCM2-214ENST00000481194 VPS72Q15906 364 aa22.63■■□□□ 1.21
CCM2-214ENST00000481194 ANKRD20A12PQ8NF67 263 aa22.63■■□□□ 1.21
CCM2-214ENST00000481194 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.63■■□□□ 1.21
CCM2-214ENST00000481194 TPM3P06753 285 aa22.62■■□□□ 1.21
CCM2-214ENST00000481194 CHMLP26374 656 aa22.62■■□□□ 1.21
CCM2-214ENST00000481194 RBM8AQ9Y5S9 174 aaKnown RBP22.61■■□□□ 1.21
CCM2-214ENST00000481194 IFIT3O14879 490 aaKnown RBP22.61■■□□□ 1.21
CCM2-214ENST00000481194 MCM5P33992 734 aa22.61■■□□□ 1.21
CCM2-214ENST00000481194 CATIPQ7Z7H3 387 aa22.61■■□□□ 1.21
CCM2-214ENST00000481194 IBTKQ9P2D0 1353 aaPredicted RBP22.61■■□□□ 1.21
CCM2-214ENST00000481194 MYO1BO43795 1136 aa22.61■■□□□ 1.21
CCM2-214ENST00000481194 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
CCM2-214ENST00000481194 MAGEB6P1A0A0J9YX57 407 aa22.61■■□□□ 1.21
CCM2-214ENST00000481194 TMTC2Q8N394 836 aa22.61■■□□□ 1.21
CCM2-214ENST00000481194 NAT10Q9H0A0 1025 aaKnown RBP22.61■■□□□ 1.21
CCM2-214ENST00000481194 RANBP6O60518 1105 aaKnown RBP22.61■■□□□ 1.21
CCM2-214ENST00000481194 PROSER3Q2NL68 480 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 XAGE2Q96GT9 111 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 SLC4A4Q9Y6R1 1079 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 CIAO1O76071 339 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 NSFL1CQ9UNZ2 370 aaKnown RBP22.6■■□□□ 1.21
CCM2-214ENST00000481194 SUPT20HQ8NEM7 779 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 CCDC43Q96MW1 224 aaKnown RBP22.6■■□□□ 1.21
CCM2-214ENST00000481194 CCDC171Q6TFL3 1326 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 ALDH1B1P30837 517 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 PDE6BP35913 854 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 CCDC83Q8IWF9 413 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
CCM2-214ENST00000481194 KINO60870 393 aaKnown RBP22.59■■□□□ 1.21
CCM2-214ENST00000481194 SSFA2P28290 1259 aa22.59■■□□□ 1.21
CCM2-214ENST00000481194 GGA1Q9UJY5 639 aa22.59■■□□□ 1.21
CCM2-214ENST00000481194 MPHOSPH10O00566 681 aaKnown RBP22.59■■□□□ 1.21
CCM2-214ENST00000481194 ZBTB1Q9Y2K1 713 aa22.59■■□□□ 1.21
CCM2-214ENST00000481194 SEC63Q9UGP8 760 aaKnown RBP22.59■■□□□ 1.21
CCM2-214ENST00000481194 CEP131Q9UPN4 1083 aa22.59■■□□□ 1.21
CCM2-214ENST00000481194 KIF5BP33176 963 aa22.58■■□□□ 1.21
CCM2-214ENST00000481194 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
CCM2-214ENST00000481194 GPR108Q9NPR9 543 aa22.58■■□□□ 1.21
CCM2-214ENST00000481194 NLGN1Q8N2Q7 840 aa22.58■■□□□ 1.21
CCM2-214ENST00000481194 SNX21Q969T3 373 aa22.58■■□□□ 1.21
CCM2-214ENST00000481194 COPRSQ9NQ92 184 aa22.58■■□□□ 1.21
CCM2-214ENST00000481194 HIBADHP31937 336 aaKnown RBP22.58■■□□□ 1.21
CCM2-214ENST00000481194 GOLGA8AA7E2F4 631 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 GOLGA8BA8MQT2 603 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 H0YIN7 160 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 SAMD1Q6SPF0 538 aaPredicted RBP22.57■■□□□ 1.2
CCM2-214ENST00000481194 TBC1D2Q9BYX2 928 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 MAST3O60307 1309 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 HELBQ8NG08 1087 aaPredicted RBP22.57■■□□□ 1.2
CCM2-214ENST00000481194 LDHBP07195 334 aaKnown RBP22.57■■□□□ 1.2
CCM2-214ENST00000481194 TPM1P09493 284 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 ESR2Q92731 530 aa22.57■■□□□ 1.2
CCM2-214ENST00000481194 TRAK2O60296 914 aa22.56■■□□□ 1.2
CCM2-214ENST00000481194 ATP5JP18859 108 aa22.56■■□□□ 1.2
CCM2-214ENST00000481194 TMEM67Q5HYA8 995 aa22.56■■□□□ 1.2
CCM2-214ENST00000481194 PLEKHG2Q9H7P9 1386 aa22.56■■□□□ 1.2
CCM2-214ENST00000481194 DBNDD2Q9BQY9 259 aa22.56■■□□□ 1.2
CCM2-214ENST00000481194 SPATA31A1Q5TZJ5 1347 aa22.56■■□□□ 1.2
CCM2-214ENST00000481194 OLFM4Q6UX06 510 aa22.55■■□□□ 1.2
CCM2-214ENST00000481194 SDF4Q9BRK5 362 aa22.55■■□□□ 1.2
CCM2-214ENST00000481194 FIBPO43427 364 aa22.55■■□□□ 1.2
CCM2-214ENST00000481194 PRPF40AO75400 957 aaKnown RBP22.55■■□□□ 1.2
CCM2-214ENST00000481194 SSRP1Q08945 709 aaKnown RBP22.55■■□□□ 1.2
CCM2-214ENST00000481194 GJD4Q96KN9 370 aaPredicted RBP22.55■■□□□ 1.2
CCM2-214ENST00000481194 WDR66Q8TBY9 1149 aa22.55■■□□□ 1.2
CCM2-214ENST00000481194 UFL1O94874 794 aa22.55■■□□□ 1.2
CCM2-214ENST00000481194 CLEC4GQ6UXB4 293 aa22.55■■□□□ 1.2
CCM2-214ENST00000481194 MYOM1P52179 1685 aa22.54■■□□□ 1.2
CCM2-214ENST00000481194 TMC4Q7Z404 712 aa22.54■■□□□ 1.2
CCM2-214ENST00000481194 ZNF594Q96JF6 807 aaPredicted RBP22.54■■□□□ 1.2
CCM2-214ENST00000481194 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
CCM2-214ENST00000481194 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
CCM2-214ENST00000481194 MAGEB6Q8N7X4 407 aa22.54■■□□□ 1.2
CCM2-214ENST00000481194 FAM13BQ9NYF5 915 aa22.54■■□□□ 1.2
CCM2-214ENST00000481194 COL3A1P02461 1466 aaPredicted RBP22.54■■□□□ 1.2
CCM2-214ENST00000481194 TSPY2A6NKD2 308 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 CDK5RAP3Q96JB5 506 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 CABP5Q9NP86 173 aa22.53■■□□□ 1.2
CCM2-214ENST00000481194 RPS8P62241 208 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms