RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 SOX18P35713 384 aa9.35□□□□□ -0.91
PTPN12-211ENST00000481154 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-211ENST00000481154 PHLDB3Q6NSJ2 640 aa9.35□□□□□ -0.91
PTPN12-211ENST00000481154 ILDR2Q71H61 639 aa9.35□□□□□ -0.91
PTPN12-211ENST00000481154 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-211ENST00000481154 GDF6Q6KF10 455 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-211ENST00000481154 WFDC8Q8IUA0 241 aa9.34□□□□□ -0.91
PTPN12-211ENST00000481154 OR13H1Q8NG92 308 aa9.34□□□□□ -0.91
PTPN12-211ENST00000481154 EDEM1Q92611 657 aa9.34□□□□□ -0.91
PTPN12-211ENST00000481154 NACC1Q96RE7 527 aa9.34□□□□□ -0.91
PTPN12-211ENST00000481154 FNDC3AQ9Y2H6 1198 aaKnown RBP9.34□□□□□ -0.91
PTPN12-211ENST00000481154 A6NHS1 94 aa9.33□□□□□ -0.92
PTPN12-211ENST00000481154 CYP2E1P05181 493 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-211ENST00000481154 HOXD8P13378 290 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-211ENST00000481154 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
PTPN12-211ENST00000481154 TTC9Q92623 222 aa9.33□□□□□ -0.92
PTPN12-211ENST00000481154 EIF1AXP47813 144 aaKnown RBP9.32□□□□□ -0.92
PTPN12-211ENST00000481154 NOM1Q5C9Z4 860 aaKnown RBP9.32□□□□□ -0.92
PTPN12-211ENST00000481154 TTC39BQ5VTQ0 682 aaPredicted RBP9.32□□□□□ -0.92
PTPN12-211ENST00000481154 RBSNQ9H1K0 784 aa9.32□□□□□ -0.92
PTPN12-211ENST00000481154 ABI2Q9NYB9 513 aaPredicted RBP9.32□□□□□ -0.92
PTPN12-211ENST00000481154 TMEM63CQ9P1W3 806 aa9.32□□□□□ -0.92
PTPN12-211ENST00000481154 TRIM33Q9UPN9 1127 aa9.32□□□□□ -0.92
PTPN12-211ENST00000481154 ATP11AP98196 1134 aa9.31□□□□□ -0.92
PTPN12-211ENST00000481154 ZNF438Q7Z4V0 828 aa9.31□□□□□ -0.92
PTPN12-211ENST00000481154 ELP3Q9H9T3 547 aa9.31□□□□□ -0.92
PTPN12-211ENST00000481154 TPSG1Q9NRR2 321 aa9.31□□□□□ -0.92
PTPN12-211ENST00000481154 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
PTPN12-211ENST00000481154 C9orf172C9J069 976 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 PDGFAP04085 211 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 HYAL2Q12891 473 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 MBTPS1Q14703 1052 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 IL22RA1Q8N6P7 574 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 KRTAP9-2Q9BYQ4 174 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 GGNBP2Q9H3C7 697 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 SEMA6BQ9H3T3 888 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 ANO2Q9NQ90 1003 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 KANSL3Q9P2N6 904 aa9.3□□□□□ -0.92
PTPN12-211ENST00000481154 DEAF1O75398 565 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-211ENST00000481154 ABL1P00519 1130 aa9.29□□□□□ -0.92
PTPN12-211ENST00000481154 ZNF211Q13398 564 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-211ENST00000481154 ADGRE1Q14246 886 aa9.29□□□□□ -0.92
PTPN12-211ENST00000481154 C8orf34Q49A92 452 aa9.29□□□□□ -0.92
PTPN12-211ENST00000481154 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
PTPN12-211ENST00000481154 LENG1Q96BZ8 264 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-211ENST00000481154 PSMG3-AS1Q96PY0 264 aa9.29□□□□□ -0.92
PTPN12-211ENST00000481154 USP21Q9UK80 565 aa9.29□□□□□ -0.92
PTPN12-211ENST00000481154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-211ENST00000481154 PDE12Q6L8Q7 609 aaKnown RBP9.28□□□□□ -0.92
PTPN12-211ENST00000481154 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
PTPN12-211ENST00000481154 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
PTPN12-211ENST00000481154 AAMPQ13685 434 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 CEP135Q66GS9 1140 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 ADAMTSL4Q6UY14 1074 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 SPACA7Q96KW9 195 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 RASSF4Q9H2L5 321 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 POLIQ9UNA4 740 aa9.27□□□□□ -0.93
PTPN12-211ENST00000481154 MZF1P28698 734 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-211ENST00000481154 RSPO4Q2I0M5 234 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-211ENST00000481154 TXNRD3Q86VQ6 643 aa9.26□□□□□ -0.93
PTPN12-211ENST00000481154 C1orf127Q8N9H9 656 aa9.26□□□□□ -0.93
PTPN12-211ENST00000481154 USTQ9Y2C2 406 aa9.26□□□□□ -0.93
PTPN12-211ENST00000481154 KRTAP9-6A0A140TA67 174 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 KIF4AO95239 1232 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 ACPPP15309 386 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 PCSK2P16519 638 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-211ENST00000481154 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-211ENST00000481154 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 RETREG2Q8NC44 543 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 MTMR7Q9Y216 660 aa9.25□□□□□ -0.93
PTPN12-211ENST00000481154 CDC25BP30305 580 aa9.24□□□□□ -0.93
PTPN12-211ENST00000481154 NRG1Q02297 640 aaPredicted RBP9.24□□□□□ -0.93
PTPN12-211ENST00000481154 ALKBH2Q6NS38 261 aa9.24□□□□□ -0.93
PTPN12-211ENST00000481154 TXNDC11Q6PKC3 985 aa9.24□□□□□ -0.93
PTPN12-211ENST00000481154 TTC16Q8NEE8 873 aa9.24□□□□□ -0.93
PTPN12-211ENST00000481154 DLL1O00548 723 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPN12-211ENST00000481154 FAM13AO94988 1023 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 RPLP1P05386 114 aaKnown RBP9.23□□□□□ -0.93
PTPN12-211ENST00000481154 NPR3P17342 541 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 SERPINB4P48594 390 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 FKBP4Q02790 459 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPN12-211ENST00000481154 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 NKAPLQ5M9Q1 402 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 HOMEZQ8IX15 550 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 CEP120Q8N960 986 aa9.23□□□□□ -0.93
PTPN12-211ENST00000481154 LINC01387J3KSC0 135 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 FZD6O60353 706 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 TRPA1O75762 1119 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 CES1P23141 567 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 IREB2P48200 963 aaKnown RBP9.22□□□□□ -0.93
PTPN12-211ENST00000481154 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
PTPN12-211ENST00000481154 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 XKR5Q6UX68 686 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
PTPN12-211ENST00000481154 NOS3P29474 1203 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms