RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CTBSQ01459 385 aa8.55□□□□□ -1.04
UPF3A-207ENST00000481131 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
UPF3A-207ENST00000481131 LATS2Q9NRM7 1088 aa8.55□□□□□ -1.04
UPF3A-207ENST00000481131 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.55□□□□□ -1.04
UPF3A-207ENST00000481131 AK5Q9Y6K8 562 aa8.55□□□□□ -1.04
UPF3A-207ENST00000481131 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 FGFR3P22607 806 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 LYPD4Q6UWN0 246 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 BHMTQ93088 406 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 BCL11AQ9H165 835 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
UPF3A-207ENST00000481131 MAP3K6O95382 1288 aa8.53□□□□□ -1.04
UPF3A-207ENST00000481131 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
UPF3A-207ENST00000481131 PEAR1Q5VY43 1037 aaPredicted RBP8.53□□□□□ -1.04
UPF3A-207ENST00000481131 PNMA5Q96PV4 448 aa8.53□□□□□ -1.04
UPF3A-207ENST00000481131 TLR7Q9NYK1 1049 aaKnown RBP8.53□□□□□ -1.04
UPF3A-207ENST00000481131 SALL4Q9UJQ4 1053 aa8.53□□□□□ -1.04
UPF3A-207ENST00000481131 ADAMTS8Q9UP79 889 aa8.53□□□□□ -1.04
UPF3A-207ENST00000481131 C2CD2LO14523 706 aa8.52□□□□□ -1.05
UPF3A-207ENST00000481131 HOXD8P13378 290 aaPredicted RBP8.52□□□□□ -1.05
UPF3A-207ENST00000481131 PMEPA1Q969W9 287 aa8.52□□□□□ -1.05
UPF3A-207ENST00000481131 C12orf49Q9H741 205 aa8.52□□□□□ -1.05
UPF3A-207ENST00000481131 A0A1W2PP55 124 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 ARHGEF15O94989 841 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 ACPPP15309 386 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 EIF4BP23588 611 aaKnown RBP8.51□□□□□ -1.05
UPF3A-207ENST00000481131 HDLBPQ00341 1268 aaKnown RBP8.51□□□□□ -1.05
UPF3A-207ENST00000481131 GRM2Q14416 872 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 NXPE4Q6UWF7 544 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 BCO2Q9BYV7 579 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 NLRP2Q9NX02 1062 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 PHF24Q9UPV7 400 aa8.51□□□□□ -1.05
UPF3A-207ENST00000481131 IGF1RP08069 1367 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 SCAMP3O14828 347 aaKnown RBP8.5□□□□□ -1.05
UPF3A-207ENST00000481131 KIF4AO95239 1232 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 SOX18P35713 384 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 DHX32Q7L7V1 743 aaKnown RBP8.5□□□□□ -1.05
UPF3A-207ENST00000481131 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 TMEM87AQ8NBN3 555 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 CRELD1Q96HD1 420 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 TRERF1Q96PN7 1200 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
UPF3A-207ENST00000481131 PHF20L1A8MW92 1017 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 ZBTB42B2RXF5 422 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 GIPC1O14908 333 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 GADD45BO75293 160 aaPredicted RBP8.49□□□□□ -1.05
UPF3A-207ENST00000481131 PSAPP07602 524 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 FANCCQ00597 558 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 SRSF11Q05519 484 aaKnown RBP8.49□□□□□ -1.05
UPF3A-207ENST00000481131 KIAA0319Q5VV43 1072 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 METTL16Q86W50 562 aaKnown RBP8.49□□□□□ -1.05
UPF3A-207ENST00000481131 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
UPF3A-207ENST00000481131 CELA2BP08218 269 aaPredicted RBP8.48□□□□□ -1.05
UPF3A-207ENST00000481131 USP17L7P0C7H9 530 aa8.48□□□□□ -1.05
UPF3A-207ENST00000481131 EDN3P14138 238 aa8.48□□□□□ -1.05
UPF3A-207ENST00000481131 PLAURQ03405 335 aa8.48□□□□□ -1.05
UPF3A-207ENST00000481131 FOXR1Q6PIV2 292 aa8.48□□□□□ -1.05
UPF3A-207ENST00000481131 NSUN5Q96P11 429 aaKnown RBP8.48□□□□□ -1.05
UPF3A-207ENST00000481131 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 ITGAEP38570 1179 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 RASSF7Q02833 373 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 MLLT1Q03111 559 aaPredicted RBP8.47□□□□□ -1.05
UPF3A-207ENST00000481131 HYAL2Q12891 473 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 ZNF468Q5VIY5 522 aaPredicted RBP8.47□□□□□ -1.05
UPF3A-207ENST00000481131 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 CEP120Q8N960 986 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 TRPM4Q8TD43 1214 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 ACDQ96AP0 544 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 ZKSCAN3Q9BRR0 538 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 KRTAP4-6Q9BYQ5 205 aa8.47□□□□□ -1.05
UPF3A-207ENST00000481131 TRPA1O75762 1119 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 NRLP54845 237 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 RAD51AP2Q09MP3 1159 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 MEI1Q5TIA1 1274 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 NCAPG2Q86XI2 1143 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 C3orf58Q8NDZ4 430 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 TCF12Q99081 682 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 EHD4Q9H223 541 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 PRR12Q9ULL5 1215 aa8.46□□□□□ -1.06
UPF3A-207ENST00000481131 NFKBIEO00221 500 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 BMP4P12644 408 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 PCBP4P57723 403 aaKnown RBP8.45□□□□□ -1.06
UPF3A-207ENST00000481131 GPLD1P80108 840 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 PRPF40BQ6NWY9 871 aaKnown RBP8.45□□□□□ -1.06
UPF3A-207ENST00000481131 C1orf229Q6ZS94 237 aaPredicted RBP8.45□□□□□ -1.06
UPF3A-207ENST00000481131 OSMRQ99650 979 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 SRCIN1Q9C0H9 1055 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 METTL5Q9NRN9 209 aaKnown RBP8.45□□□□□ -1.06
UPF3A-207ENST00000481131 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
UPF3A-207ENST00000481131 DNAJB12Q9NXW2 375 aaKnown RBP8.45□□□□□ -1.06
UPF3A-207ENST00000481131 J3QW42 95 aa8.44□□□□□ -1.06
UPF3A-207ENST00000481131 MX2P20592 715 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms