RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 EPS15P42566 896 aa14.54□□□□□ -0.08
CCM2-213ENST00000480658 GMPSP49915 693 aaPredicted RBP14.54□□□□□ -0.08
CCM2-213ENST00000480658 CWF19L2Q2TBE0 894 aaKnown RBP14.54□□□□□ -0.08
CCM2-213ENST00000480658 PODNQ7Z5L7 613 aa14.54□□□□□ -0.08
CCM2-213ENST00000480658 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
CCM2-213ENST00000480658 ANKRD2Q9GZV1 360 aa14.54□□□□□ -0.08
CCM2-213ENST00000480658 MED23Q9ULK4 1368 aa14.54□□□□□ -0.08
CCM2-213ENST00000480658 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
CCM2-213ENST00000480658 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
CCM2-213ENST00000480658 RAD17O75943 681 aa14.53□□□□□ -0.08
CCM2-213ENST00000480658 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
CCM2-213ENST00000480658 MPHOSPH8Q99549 860 aa14.53□□□□□ -0.08
CCM2-213ENST00000480658 POLLQ9UGP5 575 aa14.53□□□□□ -0.08
CCM2-213ENST00000480658 PTPRCP08575 1304 aa14.52□□□□□ -0.08
CCM2-213ENST00000480658 MYO3BQ8WXR4 1341 aa14.52□□□□□ -0.08
CCM2-213ENST00000480658 HTRA3P83110 453 aa14.52□□□□□ -0.09
CCM2-213ENST00000480658 G2E3Q7L622 706 aa14.52□□□□□ -0.09
CCM2-213ENST00000480658 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.09
CCM2-213ENST00000480658 CNOT7Q9UIV1 285 aaKnown RBP14.52□□□□□ -0.09
CCM2-213ENST00000480658 LEMD3Q9Y2U8 911 aa14.52□□□□□ -0.09
CCM2-213ENST00000480658 ANKRD18BA2A2Z9 1011 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 RASSF10A6NK89 507 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 RIMBP2O15034 1052 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 ALDH1L1O75891 902 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
CCM2-213ENST00000480658 ECE1P42892 770 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 CDC37L1Q7L3B6 337 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 AGBL3Q8NEM8 1001 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 GREM2Q9H772 168 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 DBNDD1Q9H9R9 158 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 PGAP2Q9UHJ9 254 aa14.51□□□□□ -0.09
CCM2-213ENST00000480658 ABT1Q9ULW3 272 aaKnown RBP14.51□□□□□ -0.09
CCM2-213ENST00000480658 YDJCA8MPS7 323 aa14.5□□□□□ -0.09
CCM2-213ENST00000480658 PSMD14O00487 310 aa14.5□□□□□ -0.09
CCM2-213ENST00000480658 ITGA6P23229 1130 aa14.5□□□□□ -0.09
CCM2-213ENST00000480658 IFIT5Q13325 482 aaKnown RBP14.5□□□□□ -0.09
CCM2-213ENST00000480658 MICALL2Q8IY33 904 aa14.5□□□□□ -0.09
CCM2-213ENST00000480658 AIDAQ96BJ3 306 aa14.5□□□□□ -0.09
CCM2-213ENST00000480658 C9orf78Q9NZ63 289 aaPredicted RBP14.5□□□□□ -0.09
CCM2-213ENST00000480658 TAF1P21675 1872 aa14.5□□□□□ -0.09
CCM2-213ENST00000480658 GRM8O00222 908 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 CSF1RP07333 972 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 VIL1P09327 827 aaKnown RBP14.49□□□□□ -0.09
CCM2-213ENST00000480658 KCNJ4P48050 445 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 DEFB115Q30KQ5 88 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 BEND3Q5T5X7 828 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 HHIPL1Q96JK4 782 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 CCDC85AQ96PX6 553 aaPredicted RBP14.49□□□□□ -0.09
CCM2-213ENST00000480658 SRCIN1Q9C0H9 1055 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 COA1Q9GZY4 146 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 MINPP1Q9UNW1 487 aa14.49□□□□□ -0.09
CCM2-213ENST00000480658 CCT4P50991 539 aaKnown RBP14.48□□□□□ -0.09
CCM2-213ENST00000480658 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
CCM2-213ENST00000480658 IFFO2Q5TF58 517 aa14.48□□□□□ -0.09
CCM2-213ENST00000480658 SLC51AQ86UW1 340 aa14.48□□□□□ -0.09
CCM2-213ENST00000480658 OGFOD1Q8N543 542 aa14.48□□□□□ -0.09
CCM2-213ENST00000480658 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
CCM2-213ENST00000480658 USP17L3A6NCW0 530 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 USP17L4A6NCW7 530 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 CASP7P55210 303 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 DOK7Q18PE1 504 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 CCDC57Q2TAC2 916 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 TAF7LQ5H9L4 462 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 RSBN1LQ6PCB5 846 aaPredicted RBP14.47□□□□□ -0.09
CCM2-213ENST00000480658 USP17L1Q7RTZ2 530 aa14.47□□□□□ -0.09
CCM2-213ENST00000480658 DCPSQ96C86 337 aaKnown RBP14.47□□□□□ -0.09
CCM2-213ENST00000480658 ZNF804BA4D1E1 1349 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 COL4A1P02462 1669 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 PSME4Q14997 1843 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 HSPA1AP0DMV8 641 aaKnown RBP14.46□□□□□ -0.09
CCM2-213ENST00000480658 HSPA1BP0DMV9 641 aaKnown RBP14.46□□□□□ -0.09
CCM2-213ENST00000480658 FAM161AQ3B820 660 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 JARID2Q92833 1246 aaPredicted RBP14.46□□□□□ -0.09
CCM2-213ENST00000480658 BEGAINQ9BUH8 593 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
CCM2-213ENST00000480658 HDAC5Q9UQL6 1122 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 TLL2Q9Y6L7 1015 aa14.46□□□□□ -0.09
CCM2-213ENST00000480658 TRPM7Q96QT4 1865 aa14.46□□□□□ -0.1
CCM2-213ENST00000480658 PITPNM2Q9BZ72 1349 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 THSD7BQ9C0I4 1608 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 USP17L8P0C7I0 530 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 KIF4BQ2VIQ3 1234 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 STRIP1Q5VSL9 837 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 SULF1Q8IWU6 871 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
CCM2-213ENST00000480658 CHMP3Q9Y3E7 222 aa14.45□□□□□ -0.1
CCM2-213ENST00000480658 SPEF2Q9C093 1822 aa14.44□□□□□ -0.1
CCM2-213ENST00000480658 F6X3S4 739 aa14.44□□□□□ -0.1
CCM2-213ENST00000480658 CELF2O95319 508 aaKnown RBP14.44□□□□□ -0.1
CCM2-213ENST00000480658 ZNF280AP59817 542 aaPredicted RBP14.44□□□□□ -0.1
CCM2-213ENST00000480658 SLFN5Q08AF3 891 aa14.44□□□□□ -0.1
CCM2-213ENST00000480658 SLC4A10Q6U841 1118 aa14.44□□□□□ -0.1
CCM2-213ENST00000480658 HDAC9Q9UKV0 1011 aa14.44□□□□□ -0.1
CCM2-213ENST00000480658 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
CCM2-213ENST00000480658 CA12O43570 354 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 MAP2K2P36507 400 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 VEGFBP49765 207 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 CHRNDQ07001 517 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms