RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MICALL1Q8N3F8 863 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 LPIN3Q9BQK8 851 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 FOXD3Q9UJU5 478 aaPredicted RBP9.52□□□□□ -0.89
CALD1-219ENST00000480638 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 J3QW42 95 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 KIF4AO95239 1232 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 IGHA2P01877 340 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
CALD1-219ENST00000480638 SIK1P57059 783 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 HYAL2Q12891 473 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 C8orf86Q6ZUL3 223 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 SCARF2Q96GP6 870 aaPredicted RBP9.51□□□□□ -0.89
CALD1-219ENST00000480638 FRRS1LQ9P0K9 344 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 KANSL3Q9P2N6 904 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 MKL2Q9ULH7 1088 aa9.51□□□□□ -0.89
CALD1-219ENST00000480638 GPR182O15218 404 aa9.5□□□□□ -0.89
CALD1-219ENST00000480638 PHACTR2O75167 634 aa9.5□□□□□ -0.89
CALD1-219ENST00000480638 CES1P23141 567 aa9.5□□□□□ -0.89
CALD1-219ENST00000480638 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
CALD1-219ENST00000480638 NUDT8Q8WV74 236 aa9.5□□□□□ -0.89
CALD1-219ENST00000480638 JPH1Q9HDC5 661 aaPredicted RBP9.5□□□□□ -0.89
CALD1-219ENST00000480638 PRDM6Q9NQX0 595 aa9.5□□□□□ -0.89
CALD1-219ENST00000480638 GHRHP01286 108 aa9.49□□□□□ -0.89
CALD1-219ENST00000480638 ELMSAN1Q6PJG2 1045 aa9.49□□□□□ -0.89
CALD1-219ENST00000480638 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
CALD1-219ENST00000480638 BEND7Q8N7W2 519 aaPredicted RBP9.49□□□□□ -0.89
CALD1-219ENST00000480638 DMRTB1Q96MA1 342 aa9.49□□□□□ -0.89
CALD1-219ENST00000480638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.49□□□□□ -0.89
CALD1-219ENST00000480638 GNB5O14775 395 aa9.48□□□□□ -0.89
CALD1-219ENST00000480638 EREGO14944 169 aa9.48□□□□□ -0.89
CALD1-219ENST00000480638 LILRB5O75023 590 aa9.48□□□□□ -0.89
CALD1-219ENST00000480638 RGS9O75916 674 aaPredicted RBP9.48□□□□□ -0.89
CALD1-219ENST00000480638 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
CALD1-219ENST00000480638 PMEPA1Q969W9 287 aa9.48□□□□□ -0.89
CALD1-219ENST00000480638 SMG9Q9H0W8 520 aaKnown RBP9.48□□□□□ -0.89
CALD1-219ENST00000480638 RBSNQ9H1K0 784 aa9.48□□□□□ -0.89
CALD1-219ENST00000480638 RNF225M0QZC1 329 aaPredicted RBP9.47□□□□□ -0.89
CALD1-219ENST00000480638 NCAPG2Q86XI2 1143 aa9.47□□□□□ -0.89
CALD1-219ENST00000480638 ALKBH8Q96BT7 664 aaKnown RBP9.47□□□□□ -0.89
CALD1-219ENST00000480638 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
CALD1-219ENST00000480638 SALL4Q9UJQ4 1053 aa9.47□□□□□ -0.89
CALD1-219ENST00000480638 PIK3R2O00459 728 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 NID1P14543 1247 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 AFF1P51825 1210 aaKnown RBP9.46□□□□□ -0.9
CALD1-219ENST00000480638 ATP11AP98196 1134 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 TTC9Q92623 222 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 TRIM11Q96F44 468 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 SPACA7Q96KW9 195 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.9
CALD1-219ENST00000480638 NEFLP07196 543 aa9.45□□□□□ -0.9
CALD1-219ENST00000480638 ORC1Q13415 861 aa9.45□□□□□ -0.9
CALD1-219ENST00000480638 GRIK5Q16478 980 aa9.45□□□□□ -0.9
CALD1-219ENST00000480638 CEP120Q8N960 986 aa9.45□□□□□ -0.9
CALD1-219ENST00000480638 NIF3L1Q9GZT8 377 aa9.45□□□□□ -0.9
CALD1-219ENST00000480638 ACPPP15309 386 aa9.44□□□□□ -0.9
CALD1-219ENST00000480638 ASB16Q96NS5 453 aa9.44□□□□□ -0.9
CALD1-219ENST00000480638 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
CALD1-219ENST00000480638 RASSF4Q9H2L5 321 aa9.44□□□□□ -0.9
CALD1-219ENST00000480638 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
CALD1-219ENST00000480638 TREHO43280 583 aa9.43□□□□□ -0.9
CALD1-219ENST00000480638 IRS1P35568 1242 aa9.43□□□□□ -0.9
CALD1-219ENST00000480638 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
CALD1-219ENST00000480638 CPNE3O75131 537 aaKnown RBP9.42□□□□□ -0.9
CALD1-219ENST00000480638 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
CALD1-219ENST00000480638 ZSCAN29Q8IWY8 852 aaPredicted RBP9.42□□□□□ -0.9
CALD1-219ENST00000480638 PBX4Q9BYU1 374 aa9.42□□□□□ -0.9
CALD1-219ENST00000480638 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
CALD1-219ENST00000480638 ZBTB7CA1YPR0 619 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 EIF1AYO14602 144 aaKnown RBP9.41□□□□□ -0.9
CALD1-219ENST00000480638 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
CALD1-219ENST00000480638 EDN3P14138 238 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 GSK3AP49840 483 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 DSC3Q14574 896 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 CEP135Q66GS9 1140 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 PLVAPQ9BX97 442 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 TRIM33Q9UPN9 1127 aa9.41□□□□□ -0.9
CALD1-219ENST00000480638 SMNDC1O75940 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALD1-219ENST00000480638 COL8A1P27658 744 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
CALD1-219ENST00000480638 GALNT12Q8IXK2 581 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 CSRNP1Q96S65 589 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 DNAJC25Q9H1X3 360 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 LATS2Q9NRM7 1088 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 DZANK1Q9NVP4 752 aa9.4□□□□□ -0.9
CALD1-219ENST00000480638 NFKBIEO00221 500 aa9.39□□□□□ -0.91
CALD1-219ENST00000480638 FMR1Q06787 632 aaKnown RBP eCLIP9.39□□□□□ -0.91
CALD1-219ENST00000480638 PEAR1Q5VY43 1037 aaPredicted RBP9.39□□□□□ -0.91
CALD1-219ENST00000480638 OSMRQ99650 979 aa9.39□□□□□ -0.91
CALD1-219ENST00000480638 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
CALD1-219ENST00000480638 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
CALD1-219ENST00000480638 TRPA1O75762 1119 aa9.38□□□□□ -0.91
CALD1-219ENST00000480638 ADAMTSL4Q6UY14 1074 aa9.38□□□□□ -0.91
CALD1-219ENST00000480638 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
CALD1-219ENST00000480638 WFDC8Q8IUA0 241 aa9.38□□□□□ -0.91
CALD1-219ENST00000480638 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
CALD1-219ENST00000480638 NPHS2Q9NP85 383 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms