RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 DDX46Q7L014 1031 aaKnown RBP33.59■■■□□ 2.97
TNFRSF25-213ENST00000480393 MROH5Q6ZUA9 1318 aa33.58■■■□□ 2.97
TNFRSF25-213ENST00000480393 A0A0D9SFI3 127 aa33.58■■■□□ 2.97
TNFRSF25-213ENST00000480393 GOLIM4O00461 696 aa33.57■■■□□ 2.96
TNFRSF25-213ENST00000480393 ERFEQ4G0M1 354 aa33.57■■■□□ 2.96
TNFRSF25-213ENST00000480393 MPHOSPH8Q99549 860 aa33.57■■■□□ 2.96
TNFRSF25-213ENST00000480393 GTF2E1P29083 439 aaPredicted RBP33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 RBM6P78332 1123 aaKnown RBP33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 KBTBD3Q8NAB2 608 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 FBXO41Q8TF61 875 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 ARHGEF1Q92888 912 aaKnown RBP33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 IL17RAQ96F46 866 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 SETDB2Q96T68 719 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 NYXQ9GZU5 481 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 CCDC171Q6TFL3 1326 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 ABCC12Q96J65 1359 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 SEC31BQ9NQW1 1179 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 SNRKQ9NRH2 765 aa33.56■■■□□ 2.96
TNFRSF25-213ENST00000480393 PHF14O94880 888 aa33.55■■■□□ 2.96
TNFRSF25-213ENST00000480393 IGHMBP2P38935 993 aaKnown RBP33.55■■■□□ 2.96
TNFRSF25-213ENST00000480393 VGLL2Q8N8G2 317 aa33.55■■■□□ 2.96
TNFRSF25-213ENST00000480393 SPEF2Q9C093 1822 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 MED23Q9ULK4 1368 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 PDE8BO95263 885 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 RFC4P35249 363 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 NEK4P51957 841 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 PTH1RQ03431 593 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 TRAPPC3LQ5T215 181 aa33.54■■■□□ 2.96
TNFRSF25-213ENST00000480393 TRIM37O94972 964 aa33.53■■■□□ 2.96
TNFRSF25-213ENST00000480393 LRRC4BQ9NT99 713 aa33.53■■■□□ 2.96
TNFRSF25-213ENST00000480393 COL24A1Q17RW2 1714 aa33.52■■■□□ 2.96
TNFRSF25-213ENST00000480393 PUM3Q15397 648 aaKnown RBP33.52■■■□□ 2.96
TNFRSF25-213ENST00000480393 SLC27A3Q5K4L6 730 aa33.52■■■□□ 2.96
TNFRSF25-213ENST00000480393 AMIGO3Q86WK7 504 aa33.52■■■□□ 2.96
TNFRSF25-213ENST00000480393 TICAM2Q86XR7 235 aa33.52■■■□□ 2.96
TNFRSF25-213ENST00000480393 C4AP0C0L4 1744 aa33.52■■■□□ 2.96
TNFRSF25-213ENST00000480393 KCNJ4P48050 445 aa33.51■■■□□ 2.96
TNFRSF25-213ENST00000480393 NBPF5PQ86XG9 351 aaPredicted RBP33.51■■■□□ 2.96
TNFRSF25-213ENST00000480393 CDC5LQ99459 802 aaKnown RBP33.51■■■□□ 2.96
TNFRSF25-213ENST00000480393 CHMP5Q9NZZ3 219 aa33.51■■■□□ 2.96
TNFRSF25-213ENST00000480393 SNX14Q9Y5W7 946 aa33.5■■■□□ 2.95
TNFRSF25-213ENST00000480393 FKBP4Q02790 459 aaKnown RBP eCLIP33.49■■■□□ 2.95
TNFRSF25-213ENST00000480393 IL27Q8NEV9 243 aa33.49■■■□□ 2.95
TNFRSF25-213ENST00000480393 ADRA2BP18089 450 aa33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 MCM2P49736 904 aa33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 LPIN2Q92539 896 aa33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 SF3B3Q15393 1217 aaKnown RBP33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 PRPF40BQ6NWY9 871 aaKnown RBP33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 HELBQ8NG08 1087 aaPredicted RBP33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 RBM8AQ9Y5S9 174 aaKnown RBP33.48■■■□□ 2.95
TNFRSF25-213ENST00000480393 SLC5A1P13866 664 aa33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 NFKBIBQ15653 356 aa33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 LRRFIP1Q32MZ4 808 aaKnown RBP33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 SLC10A5Q5PT55 438 aa33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 ZNF589Q86UQ0 364 aaPredicted RBP33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 MAP4K1Q92918 833 aa33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 FOXD4L1Q9NU39 408 aa33.47■■■□□ 2.95
TNFRSF25-213ENST00000480393 MCMDC2Q4G0Z9 681 aa33.46■■■□□ 2.95
TNFRSF25-213ENST00000480393 TPTE2Q6XPS3 522 aa33.45■■■□□ 2.95
TNFRSF25-213ENST00000480393 ARAP2Q8WZ64 1704 aa33.45■■■□□ 2.95
TNFRSF25-213ENST00000480393 C3orf67Q6ZVT6 689 aa33.45■■■□□ 2.94
TNFRSF25-213ENST00000480393 ANKRD18AQ8IVF6 992 aa33.45■■■□□ 2.94
TNFRSF25-213ENST00000480393 RASEFQ8IZ41 740 aa33.45■■■□□ 2.94
TNFRSF25-213ENST00000480393 UPF3BQ9BZI7 483 aaKnown RBP33.45■■■□□ 2.94
TNFRSF25-213ENST00000480393 NPHP1O15259 732 aa33.44■■■□□ 2.94
TNFRSF25-213ENST00000480393 ZKSCAN1P17029 563 aaPredicted RBP33.44■■■□□ 2.94
TNFRSF25-213ENST00000480393 ZNF512BQ96KM6 892 aaPredicted RBP33.44■■■□□ 2.94
TNFRSF25-213ENST00000480393 HELLSQ9NRZ9 838 aa33.44■■■□□ 2.94
TNFRSF25-213ENST00000480393 FGFR2P21802 821 aa33.43■■■□□ 2.94
TNFRSF25-213ENST00000480393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 RNF113AO15541 343 aaKnown RBP33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 SCARF1Q14162 830 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 NECTIN1Q15223 517 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 CIZ1Q9ULV3 898 aaPredicted RBP33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 CASZ1Q86V15 1759 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 TAF5LO75529 589 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 UQCRFS1P1P0C7P4 283 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 HMGB2P26583 209 aaKnown RBP33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 DDIT3P35638 169 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 ZAP70P43403 619 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 RNF20Q5VTR2 975 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 CREB3L3Q68CJ9 461 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 KCNB2Q92953 911 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 NLRP3Q96P20 1036 aa33.42■■■□□ 2.94
TNFRSF25-213ENST00000480393 CARMIL3Q8ND23 1372 aa33.41■■■□□ 2.94
TNFRSF25-213ENST00000480393 UBR3Q6ZT12 1888 aa33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 CHGBP05060 677 aa33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 SSFA2P28290 1259 aa33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 ZMYM1Q5SVZ6 1142 aa33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 CCDC102BQ68D86 513 aa33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 CCDC129Q6ZRS4 1044 aa33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 SEC62Q99442 399 aaKnown RBP33.4■■■□□ 2.94
TNFRSF25-213ENST00000480393 MCAMP43121 646 aa33.39■■■□□ 2.94
TNFRSF25-213ENST00000480393 CHRNDQ07001 517 aa33.39■■■□□ 2.94
TNFRSF25-213ENST00000480393 SLC27A2O14975 620 aa33.38■■■□□ 2.93
TNFRSF25-213ENST00000480393 ZFYP08048 801 aaPredicted RBP33.38■■■□□ 2.93
TNFRSF25-213ENST00000480393 ARID4AP29374 1257 aaPredicted RBP33.38■■■□□ 2.93
TNFRSF25-213ENST00000480393 PHKA1P46020 1223 aa33.38■■■□□ 2.93
TNFRSF25-213ENST00000480393 CASTP20810 708 aaKnown RBP33.37■■■□□ 2.93
TNFRSF25-213ENST00000480393 RXRBP28702 533 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms