RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
ITGB1-212ENST00000480226 CCDC82Q8N4S0 544 aa8.57□□□□□ -1.04
ITGB1-212ENST00000480226 GPR152Q8TDT2 470 aa8.57□□□□□ -1.04
ITGB1-212ENST00000480226 SUPT5HO00267 1087 aaKnown RBP8.56□□□□□ -1.04
ITGB1-212ENST00000480226 TTC39BQ5VTQ0 682 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-212ENST00000480226 OR13H1Q8NG92 308 aa8.56□□□□□ -1.04
ITGB1-212ENST00000480226 SEPT3Q9UH03 358 aa8.56□□□□□ -1.04
ITGB1-212ENST00000480226 ZBTB39O15060 712 aa8.55□□□□□ -1.04
ITGB1-212ENST00000480226 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
ITGB1-212ENST00000480226 SPACA7Q96KW9 195 aa8.55□□□□□ -1.04
ITGB1-212ENST00000480226 HYAL2Q12891 473 aa8.54□□□□□ -1.04
ITGB1-212ENST00000480226 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-212ENST00000480226 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
ITGB1-212ENST00000480226 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
ITGB1-212ENST00000480226 IL22RA1Q8N6P7 574 aa8.54□□□□□ -1.04
ITGB1-212ENST00000480226 DYRK3O43781 588 aa8.53□□□□□ -1.04
ITGB1-212ENST00000480226 RPLP1P05386 114 aaKnown RBP8.53□□□□□ -1.04
ITGB1-212ENST00000480226 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
ITGB1-212ENST00000480226 SRA1Q9HD15 236 aaKnown RBP8.53□□□□□ -1.04
ITGB1-212ENST00000480226 H2AFB1P0C5Y9 115 aa8.52□□□□□ -1.05
ITGB1-212ENST00000480226 H2AFB2P0C5Z0 115 aa8.52□□□□□ -1.05
ITGB1-212ENST00000480226 ITGB7P26010 798 aa8.52□□□□□ -1.05
ITGB1-212ENST00000480226 SCNN1AP37088 669 aa8.52□□□□□ -1.05
ITGB1-212ENST00000480226 HELQQ8TDG4 1101 aa8.52□□□□□ -1.05
ITGB1-212ENST00000480226 MUC3BQ9H195 1237 aa8.52□□□□□ -1.05
ITGB1-212ENST00000480226 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-212ENST00000480226 DEAF1O75398 565 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-212ENST00000480226 PCSK2P16519 638 aa8.51□□□□□ -1.05
ITGB1-212ENST00000480226 PDE12Q6L8Q7 609 aaKnown RBP8.51□□□□□ -1.05
ITGB1-212ENST00000480226 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
ITGB1-212ENST00000480226 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
ITGB1-212ENST00000480226 TP53INP1Q96A56 240 aa8.51□□□□□ -1.05
ITGB1-212ENST00000480226 NUDT16Q96DE0 195 aaKnown RBP8.51□□□□□ -1.05
ITGB1-212ENST00000480226 DLL1O00548 723 aa8.5□□□□□ -1.05
ITGB1-212ENST00000480226 SMNDC1O75940 238 aaKnown RBP eCLIP8.5□□□□□ -1.053e-8■□□□□ 9.4
ITGB1-212ENST00000480226 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
ITGB1-212ENST00000480226 TTC16Q8NEE8 873 aa8.5□□□□□ -1.05
ITGB1-212ENST00000480226 ELP3Q9H9T3 547 aa8.5□□□□□ -1.05
ITGB1-212ENST00000480226 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
ITGB1-212ENST00000480226 TMEM88BA6NKF7 163 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 SSFA2P28290 1259 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 IREB2P48200 963 aaKnown RBP8.49□□□□□ -1.05
ITGB1-212ENST00000480226 ZMYM1Q5SVZ6 1142 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 COL13A1Q5TAT6 717 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-212ENST00000480226 ZNF438Q7Z4V0 828 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 ATCAYQ86WG3 371 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 Q8N3U1 123 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 PPME1Q9Y570 386 aa8.49□□□□□ -1.05
ITGB1-212ENST00000480226 KIF4AO95239 1232 aa8.48□□□□□ -1.05
ITGB1-212ENST00000480226 NOS3P29474 1203 aa8.48□□□□□ -1.05
ITGB1-212ENST00000480226 CEP135Q66GS9 1140 aa8.48□□□□□ -1.05
ITGB1-212ENST00000480226 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
ITGB1-212ENST00000480226 GTF3C2Q8WUA4 911 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-212ENST00000480226 EDEM1Q92611 657 aa8.48□□□□□ -1.05
ITGB1-212ENST00000480226 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-212ENST00000480226 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
ITGB1-212ENST00000480226 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
ITGB1-212ENST00000480226 DNM1Q05193 864 aaKnown RBP8.47□□□□□ -1.05
ITGB1-212ENST00000480226 SETDB1Q15047 1291 aa8.47□□□□□ -1.05
ITGB1-212ENST00000480226 PRSS36Q5K4E3 855 aa8.47□□□□□ -1.05
ITGB1-212ENST00000480226 XP32Q5T750 250 aa8.47□□□□□ -1.05
ITGB1-212ENST00000480226 XKR5Q6UX68 686 aa8.47□□□□□ -1.05
ITGB1-212ENST00000480226 NCAPG2Q86XI2 1143 aa8.47□□□□□ -1.05
ITGB1-212ENST00000480226 CYP2E1P05181 493 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-212ENST00000480226 MZF1P28698 734 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-212ENST00000480226 CDC27P30260 824 aa8.46□□□□□ -1.06
ITGB1-212ENST00000480226 ATP11AP98196 1134 aa8.46□□□□□ -1.06
ITGB1-212ENST00000480226 TMEM130Q8N3G9 435 aa8.46□□□□□ -1.06
ITGB1-212ENST00000480226 LACRTQ9GZZ8 138 aa8.46□□□□□ -1.06
ITGB1-212ENST00000480226 AKTIPQ9H8T0 292 aa8.46□□□□□ -1.06
ITGB1-212ENST00000480226 TMEM63CQ9P1W3 806 aa8.46□□□□□ -1.06
ITGB1-212ENST00000480226 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
ITGB1-212ENST00000480226 PDGFAP04085 211 aa8.45□□□□□ -1.06
ITGB1-212ENST00000480226 MPSTP25325 297 aa8.45□□□□□ -1.06
ITGB1-212ENST00000480226 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
ITGB1-212ENST00000480226 C8orf34Q49A92 452 aa8.45□□□□□ -1.06
ITGB1-212ENST00000480226 PBX4Q9BYU1 374 aa8.45□□□□□ -1.06
ITGB1-212ENST00000480226 RASSF4Q9H2L5 321 aa8.45□□□□□ -1.06
ITGB1-212ENST00000480226 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
ITGB1-212ENST00000480226 AAMPQ13685 434 aa8.44□□□□□ -1.06
ITGB1-212ENST00000480226 FAM117BQ6P1L5 589 aa8.44□□□□□ -1.06
ITGB1-212ENST00000480226 CEP120Q8N960 986 aa8.44□□□□□ -1.06
ITGB1-212ENST00000480226 PMEPA1Q969W9 287 aa8.44□□□□□ -1.06
ITGB1-212ENST00000480226 CNTN3Q9P232 1028 aa8.44□□□□□ -1.06
ITGB1-212ENST00000480226 FAM13AO94988 1023 aa8.43□□□□□ -1.06
ITGB1-212ENST00000480226 CES1P23141 567 aa8.43□□□□□ -1.06
ITGB1-212ENST00000480226 MEGF10Q96KG7 1140 aa8.43□□□□□ -1.06
ITGB1-212ENST00000480226 GGNBP2Q9H3C7 697 aa8.43□□□□□ -1.06
ITGB1-212ENST00000480226 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
ITGB1-212ENST00000480226 F8W735 103 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-212ENST00000480226 PTPRAP18433 802 aa8.42□□□□□ -1.06
ITGB1-212ENST00000480226 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
ITGB1-212ENST00000480226 KANSL3Q9P2N6 904 aa8.42□□□□□ -1.06
ITGB1-212ENST00000480226 SALL4Q9UJQ4 1053 aa8.42□□□□□ -1.06
ITGB1-212ENST00000480226 ALX3O95076 343 aa8.41□□□□□ -1.06
ITGB1-212ENST00000480226 NPR3P17342 541 aa8.41□□□□□ -1.06
ITGB1-212ENST00000480226 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
ITGB1-212ENST00000480226 MTMR3Q13615 1198 aa8.41□□□□□ -1.06
ITGB1-212ENST00000480226 ARID3AQ99856 593 aa8.41□□□□□ -1.06
ITGB1-212ENST00000480226 POLIQ9UNA4 740 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms