RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
VTI1A-204ENST00000480057 TBC1D9BQ66K14 1250 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 VGLL2Q8N8G2 317 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 CDC5LQ99459 802 aaKnown RBP13.33□□□□□ -0.28
VTI1A-204ENST00000480057 FSD1Q9BTV5 496 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 TRIM37O94972 964 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 HSPA4P34932 840 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 TIMM10P62072 90 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 CCDC85AQ96PX6 553 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-204ENST00000480057 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
VTI1A-204ENST00000480057 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 MED23Q9ULK4 1368 aa13.32□□□□□ -0.28
VTI1A-204ENST00000480057 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
VTI1A-204ENST00000480057 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
VTI1A-204ENST00000480057 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
VTI1A-204ENST00000480057 CWC27Q6UX04 472 aaKnown RBP13.31□□□□□ -0.28
VTI1A-204ENST00000480057 LPIN2Q92539 896 aa13.31□□□□□ -0.28
VTI1A-204ENST00000480057 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
VTI1A-204ENST00000480057 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
VTI1A-204ENST00000480057 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 ST18O60284 1047 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 FGFR2P21802 821 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 MCM2P49736 904 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 TTC39AQ5SRH9 613 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 GORABQ5T7V8 394 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-204ENST00000480057 FBXO41Q8TF61 875 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 KCNB2Q92953 911 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
VTI1A-204ENST00000480057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.29□□□□□ -0.28
VTI1A-204ENST00000480057 SLC5A1P13866 664 aa13.29□□□□□ -0.28
VTI1A-204ENST00000480057 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-204ENST00000480057 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-204ENST00000480057 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
VTI1A-204ENST00000480057 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-204ENST00000480057 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
VTI1A-204ENST00000480057 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
VTI1A-204ENST00000480057 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
VTI1A-204ENST00000480057 IL25Q9H293 177 aa13.29□□□□□ -0.28
VTI1A-204ENST00000480057 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-204ENST00000480057 ZFYP08048 801 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-204ENST00000480057 ARID4AP29374 1257 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-204ENST00000480057 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
VTI1A-204ENST00000480057 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
VTI1A-204ENST00000480057 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
VTI1A-204ENST00000480057 SEC31BQ9NQW1 1179 aa13.28□□□□□ -0.28
VTI1A-204ENST00000480057 HELLSQ9NRZ9 838 aa13.28□□□□□ -0.28
VTI1A-204ENST00000480057 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-204ENST00000480057 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
VTI1A-204ENST00000480057 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
VTI1A-204ENST00000480057 A0A1B0GUL6 1792 aa13.27□□□□□ -0.28
VTI1A-204ENST00000480057 ZBTB22O15209 634 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 ADORA1P30542 326 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 NFIXQ14938 502 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 TTF1Q15361 905 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-204ENST00000480057 MCMDC2Q4G0Z9 681 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 FLAD1Q8NFF5 587 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 MAP4K1Q92918 833 aa13.27□□□□□ -0.29
VTI1A-204ENST00000480057 A0A0D9SFI3 127 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 GOLIM4O00461 696 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 PHF14O94880 888 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 GYS1P13807 737 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
VTI1A-204ENST00000480057 PROM2Q8N271 834 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 FAM227BQ96M60 508 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 ANTXR1Q9H6X2 564 aa13.26□□□□□ -0.29
VTI1A-204ENST00000480057 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
VTI1A-204ENST00000480057 APBA3O96018 575 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 TM4SF1P30408 202 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 CHRNDQ07001 517 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 NECTIN1Q15223 517 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 ZMYM1Q5SVZ6 1142 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 ZSCAN25Q6NSZ9 544 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 EDC3Q96F86 508 aaKnown RBP13.25□□□□□ -0.29
VTI1A-204ENST00000480057 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 HMG20BQ9P0W2 317 aa13.25□□□□□ -0.29
VTI1A-204ENST00000480057 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-204ENST00000480057 ZKSCAN1P17029 563 aaPredicted RBP13.24□□□□□ -0.29
VTI1A-204ENST00000480057 TSGA10IPQ3SY00 556 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 SMIM5Q71RC9 77 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.29
VTI1A-204ENST00000480057 ANKRD2Q9GZV1 360 aa13.24□□□□□ -0.29
VTI1A-204ENST00000480057 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms