RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 EYA3Q99504 573 aa19.49■□□□□ 0.71
SEMA6C-206ENST00000479820 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
SEMA6C-206ENST00000479820 FKBP5Q13451 457 aaPredicted RBP19.48■□□□□ 0.71
SEMA6C-206ENST00000479820 GCKRQ14397 625 aa19.48■□□□□ 0.71
SEMA6C-206ENST00000479820 C6orf229H3BNL8 230 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 UBE3BQ7Z3V4 1068 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 ANKRD18AQ8IVF6 992 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 LINS1Q8NG48 757 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 DPF2Q92785 391 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 DBNDD1Q9H9R9 158 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 PGAP2Q9UHJ9 254 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 XDHP47989 1333 aa19.47■□□□□ 0.71
SEMA6C-206ENST00000479820 PSMD14O00487 310 aa19.46■□□□□ 0.71
SEMA6C-206ENST00000479820 ECE2O60344 883 aa19.46■□□□□ 0.71
SEMA6C-206ENST00000479820 CCDC85AQ96PX6 553 aaPredicted RBP19.46■□□□□ 0.71
SEMA6C-206ENST00000479820 CDC5LQ99459 802 aaKnown RBP19.46■□□□□ 0.71
SEMA6C-206ENST00000479820 GREM2Q9H772 168 aa19.46■□□□□ 0.71
SEMA6C-206ENST00000479820 GGA1Q9UJY5 639 aa19.46■□□□□ 0.71
SEMA6C-206ENST00000479820 UFL1O94874 794 aa19.45■□□□□ 0.7
SEMA6C-206ENST00000479820 GPR101Q96P66 508 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-206ENST00000479820 BSDC1Q9NW68 430 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-206ENST00000479820 RASSF10A6NK89 507 aa19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 RIMBP2O15034 1052 aa19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 RPS12P25398 132 aaKnown RBP19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 HIRAP54198 1017 aaPredicted RBP19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 TRPM4Q8TD43 1214 aa19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 ZC3H15Q8WU90 426 aaKnown RBP19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 BCL2L13Q9BXK5 485 aa19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 ANKIB1Q9P2G1 1089 aa19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 MKRN1Q9UHC7 482 aaKnown RBP19.44■□□□□ 0.7
SEMA6C-206ENST00000479820 CSF1RP07333 972 aa19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 BEND3Q5T5X7 828 aa19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 ZC3H12CQ9C0D7 883 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 KCNQ5Q9NR82 932 aa19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 CNOT7Q9UIV1 285 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 MED23Q9ULK4 1368 aa19.43■□□□□ 0.7
SEMA6C-206ENST00000479820 SHTN1A0MZ66 631 aa19.42■□□□□ 0.7
SEMA6C-206ENST00000479820 VIL1P09327 827 aaKnown RBP19.42■□□□□ 0.7
SEMA6C-206ENST00000479820 DOK7Q18PE1 504 aa19.42■□□□□ 0.7
SEMA6C-206ENST00000479820 MICALL2Q8IY33 904 aa19.42■□□□□ 0.7
SEMA6C-206ENST00000479820 MINPP1Q9UNW1 487 aa19.42■□□□□ 0.7
SEMA6C-206ENST00000479820 HSPA1AP0DMV8 641 aaKnown RBP19.41■□□□□ 0.7
SEMA6C-206ENST00000479820 HSPA1BP0DMV9 641 aaKnown RBP19.41■□□□□ 0.7
SEMA6C-206ENST00000479820 ATP2B4P23634 1241 aa19.41■□□□□ 0.7
SEMA6C-206ENST00000479820 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
SEMA6C-206ENST00000479820 F6X3S4 739 aa19.4■□□□□ 0.7
SEMA6C-206ENST00000479820 VEGFBP49765 207 aa19.4■□□□□ 0.7
SEMA6C-206ENST00000479820 FMR1Q06787 632 aaKnown RBP eCLIP19.4■□□□□ 0.7
SEMA6C-206ENST00000479820 FAM161AQ3B820 660 aa19.4■□□□□ 0.7
SEMA6C-206ENST00000479820 H7C1D1 291 aa19.39■□□□□ 0.69
SEMA6C-206ENST00000479820 TRAF5O00463 557 aa19.39■□□□□ 0.69
SEMA6C-206ENST00000479820 ITGA6P23229 1130 aa19.39■□□□□ 0.69
SEMA6C-206ENST00000479820 CST9Q5W186 159 aa19.39■□□□□ 0.69
SEMA6C-206ENST00000479820 WTIPA6NIX2 430 aaPredicted RBP19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 E9PSI1 815 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 EGFRP00533 1210 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 IGHMBP2P38935 993 aaKnown RBP19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 FOXO4P98177 505 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 DEFB115Q30KQ5 88 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 PODNQ7Z5L7 613 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 AGBL3Q8NEM8 1001 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 GMLQ99445 158 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 GLIS2Q9BZE0 524 aaPredicted RBP19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 ECM29Q5VYK3 1845 aa19.37■□□□□ 0.69
SEMA6C-206ENST00000479820 ALDH1L1O75891 902 aa19.36■□□□□ 0.69
SEMA6C-206ENST00000479820 SAMD7Q7Z3H4 446 aa19.36■□□□□ 0.69
SEMA6C-206ENST00000479820 LEMD3Q9Y2U8 911 aa19.36■□□□□ 0.69
SEMA6C-206ENST00000479820 TLL2Q9Y6L7 1015 aa19.36■□□□□ 0.69
SEMA6C-206ENST00000479820 GRM8O00222 908 aa19.35■□□□□ 0.69
SEMA6C-206ENST00000479820 ZNF280AP59817 542 aaPredicted RBP19.35■□□□□ 0.69
SEMA6C-206ENST00000479820 RSBN1LQ6PCB5 846 aaPredicted RBP19.35■□□□□ 0.69
SEMA6C-206ENST00000479820 CDC37L1Q7L3B6 337 aa19.35■□□□□ 0.69
SEMA6C-206ENST00000479820 ABT1Q9ULW3 272 aaKnown RBP19.35■□□□□ 0.69
SEMA6C-206ENST00000479820 ARAP2Q8WZ64 1704 aa19.34■□□□□ 0.69
SEMA6C-206ENST00000479820 IRS2Q9Y4H2 1338 aa19.34■□□□□ 0.69
SEMA6C-206ENST00000479820 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
SEMA6C-206ENST00000479820 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
SEMA6C-206ENST00000479820 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
SEMA6C-206ENST00000479820 UTYO14607 1347 aa19.33■□□□□ 0.69
SEMA6C-206ENST00000479820 WDR33Q9C0J8 1336 aaKnown RBP19.33■□□□□ 0.69
SEMA6C-206ENST00000479820 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
SEMA6C-206ENST00000479820 TBC1D10BQ4KMP7 808 aaPredicted RBP19.33■□□□□ 0.68
SEMA6C-206ENST00000479820 EPHA10Q5JZY3 1008 aa19.33■□□□□ 0.68
SEMA6C-206ENST00000479820 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.68
SEMA6C-206ENST00000479820 HHIPL1Q96JK4 782 aa19.33■□□□□ 0.68
SEMA6C-206ENST00000479820 WBP1LQ9NX94 342 aa19.33■□□□□ 0.68
SEMA6C-206ENST00000479820 ZNF804BA4D1E1 1349 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 ANKRD18BA2A2Z9 1011 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 USP17L3A6NCW0 530 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 USP17L4A6NCW7 530 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 G3V3G9 751 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 CELF2O95319 508 aaKnown RBP19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 KIF4BQ2VIQ3 1234 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 USP17L1Q7RTZ2 530 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 SAPCD2Q86UD0 394 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 TXNRD3Q86VQ6 643 aa19.32■□□□□ 0.68
SEMA6C-206ENST00000479820 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms