RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 HACL1Q9UJ83 578 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 MINPP1Q9UNW1 487 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
SP140-210ENST00000479539 GGA1Q9UJY5 639 aa13.34□□□□□ -0.27
SP140-210ENST00000479539 UTYO14607 1347 aa13.34□□□□□ -0.27
SP140-210ENST00000479539 XDHP47989 1333 aa13.34□□□□□ -0.27
SP140-210ENST00000479539 COL4A1P02462 1669 aa13.34□□□□□ -0.27
SP140-210ENST00000479539 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
SP140-210ENST00000479539 WDR90Q96KV7 1748 aa13.33□□□□□ -0.27
SP140-210ENST00000479539 YDJCA8MPS7 323 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 EPHX2P34913 555 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
SP140-210ENST00000479539 SCNN1DP51172 638 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 APLP1P51693 650 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
SP140-210ENST00000479539 TNIP1Q15025 636 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 EPHA10Q5JZY3 1008 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
SP140-210ENST00000479539 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
SP140-210ENST00000479539 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 UFL1O94874 794 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 HNRNPUQ00839 825 aaKnown RBP eCLIP13.32□□□□□ -0.28
SP140-210ENST00000479539 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 LMBR1LQ6UX01 489 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 PNMA8AQ86V59 439 aaPredicted RBP13.32□□□□□ -0.28
SP140-210ENST00000479539 LDHDQ86WU2 507 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 GPR101Q96P66 508 aaPredicted RBP13.32□□□□□ -0.28
SP140-210ENST00000479539 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
SP140-210ENST00000479539 RAD17O75943 681 aa13.31□□□□□ -0.28
SP140-210ENST00000479539 NBPF7P0C2Y1 421 aaPredicted RBP13.31□□□□□ -0.28
SP140-210ENST00000479539 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
SP140-210ENST00000479539 EPS15P42566 896 aa13.31□□□□□ -0.28
SP140-210ENST00000479539 IFIT5Q13325 482 aaKnown RBP13.31□□□□□ -0.28
SP140-210ENST00000479539 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
SP140-210ENST00000479539 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
SP140-210ENST00000479539 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
SP140-210ENST00000479539 DBNDD1Q9H9R9 158 aa13.31□□□□□ -0.28
SP140-210ENST00000479539 NOB1Q9ULX3 412 aaKnown RBP13.31□□□□□ -0.28
SP140-210ENST00000479539 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
SP140-210ENST00000479539 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 LAMB2P55268 1798 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 CACNA1SQ13698 1873 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 WTIPA6NIX2 430 aaPredicted RBP13.3□□□□□ -0.28
SP140-210ENST00000479539 ECE2O60344 883 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 GMPSP49915 693 aaPredicted RBP13.3□□□□□ -0.28
SP140-210ENST00000479539 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
SP140-210ENST00000479539 EAPPQ56P03 285 aaPredicted RBP13.3□□□□□ -0.28
SP140-210ENST00000479539 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
SP140-210ENST00000479539 CCDC57Q2TAC2 916 aa13.29□□□□□ -0.28
SP140-210ENST00000479539 USP50Q70EL3 339 aaPredicted RBP13.29□□□□□ -0.28
SP140-210ENST00000479539 ARHGAP45Q92619 1136 aa13.29□□□□□ -0.28
SP140-210ENST00000479539 DPF2Q92785 391 aa13.29□□□□□ -0.28
SP140-210ENST00000479539 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
SP140-210ENST00000479539 KCNQ5Q9NR82 932 aa13.29□□□□□ -0.28
SP140-210ENST00000479539 CHMP3Q9Y3E7 222 aa13.29□□□□□ -0.28
SP140-210ENST00000479539 PSMD14O00487 310 aa13.28□□□□□ -0.28
SP140-210ENST00000479539 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
SP140-210ENST00000479539 CHRNDQ07001 517 aa13.28□□□□□ -0.28
SP140-210ENST00000479539 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
SP140-210ENST00000479539 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
SP140-210ENST00000479539 DNAJC5GQ8N7S2 189 aa13.28□□□□□ -0.28
SP140-210ENST00000479539 ADARB2Q9NS39 739 aaKnown RBP13.28□□□□□ -0.28
SP140-210ENST00000479539 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
SP140-210ENST00000479539 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
SP140-210ENST00000479539 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.28
SP140-210ENST00000479539 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.28
SP140-210ENST00000479539 G3V3G9 751 aa13.27□□□□□ -0.29
SP140-210ENST00000479539 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
SP140-210ENST00000479539 RPS12P25398 132 aaKnown RBP13.27□□□□□ -0.29
SP140-210ENST00000479539 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
SP140-210ENST00000479539 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
SP140-210ENST00000479539 BICC1Q9H694 974 aaKnown RBP13.27□□□□□ -0.29
SP140-210ENST00000479539 CNOT7Q9UIV1 285 aaKnown RBP13.27□□□□□ -0.29
SP140-210ENST00000479539 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
SP140-210ENST00000479539 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
SP140-210ENST00000479539 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
SP140-210ENST00000479539 MED23Q9ULK4 1368 aa13.27□□□□□ -0.29
SP140-210ENST00000479539 HTRA3P83110 453 aa13.26□□□□□ -0.29
SP140-210ENST00000479539 LDHAL6AQ6ZMR3 332 aa13.26□□□□□ -0.29
SP140-210ENST00000479539 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
SP140-210ENST00000479539 CNTROBQ8N137 903 aa13.26□□□□□ -0.29
SP140-210ENST00000479539 ZNF594Q96JF6 807 aaPredicted RBP13.26□□□□□ -0.29
SP140-210ENST00000479539 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
SP140-210ENST00000479539 PASKQ96RG2 1323 aa13.26□□□□□ -0.29
SP140-210ENST00000479539 TAF1P21675 1872 aa13.25□□□□□ -0.29
SP140-210ENST00000479539 H7C1D1 291 aa13.25□□□□□ -0.29
SP140-210ENST00000479539 IPO8O15397 1037 aaKnown RBP13.25□□□□□ -0.29
SP140-210ENST00000479539 BCAR3O75815 825 aa13.25□□□□□ -0.29
SP140-210ENST00000479539 HIRAP54198 1017 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms