RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 GRM1Q13255 1194 aa22.31■■□□□ 1.16
ECHDC1-216ENST00000479525 USP50Q70EL3 339 aaPredicted RBP22.31■■□□□ 1.16
ECHDC1-216ENST00000479525 ANKIB1Q9P2G1 1089 aa22.31■■□□□ 1.16
ECHDC1-216ENST00000479525 IL16Q14005 1332 aa22.31■■□□□ 1.16
ECHDC1-216ENST00000479525 RTL9Q8NET4 1388 aa22.3■■□□□ 1.16
ECHDC1-216ENST00000479525 NEURL1BA8MQ27 555 aa22.3■■□□□ 1.16
ECHDC1-216ENST00000479525 FLIIQ13045 1269 aa22.3■■□□□ 1.16
ECHDC1-216ENST00000479525 UBE3BQ7Z3V4 1068 aa22.3■■□□□ 1.16
ECHDC1-216ENST00000479525 GLIS2Q9BZE0 524 aaPredicted RBP22.3■■□□□ 1.16
ECHDC1-216ENST00000479525 CNOT7Q9UIV1 285 aaKnown RBP22.3■■□□□ 1.16
ECHDC1-216ENST00000479525 EGFRP00533 1210 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 CTSWP56202 376 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 NEXNQ0ZGT2 675 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 TNIP1Q15025 636 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 SAMD7Q7Z3H4 446 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 MICALL2Q8IY33 904 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 GREM2Q9H772 168 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 PSME4Q14997 1843 aa22.29■■□□□ 1.16
ECHDC1-216ENST00000479525 VAMP4O75379 141 aa22.28■■□□□ 1.16
ECHDC1-216ENST00000479525 RBM26Q5T8P6 1007 aaKnown RBP22.28■■□□□ 1.16
ECHDC1-216ENST00000479525 PAXIP1Q6ZW49 1069 aaPredicted RBP22.28■■□□□ 1.16
ECHDC1-216ENST00000479525 ANKRD18AQ8IVF6 992 aa22.28■■□□□ 1.16
ECHDC1-216ENST00000479525 CDHR2Q9BYE9 1310 aa22.28■■□□□ 1.16
ECHDC1-216ENST00000479525 F6X3S4 739 aa22.27■■□□□ 1.16
ECHDC1-216ENST00000479525 TBC1D10BQ4KMP7 808 aaPredicted RBP22.27■■□□□ 1.16
ECHDC1-216ENST00000479525 ZNF408Q9H9D4 720 aa22.27■■□□□ 1.16
ECHDC1-216ENST00000479525 GGA1Q9UJY5 639 aa22.27■■□□□ 1.16
ECHDC1-216ENST00000479525 CAPN15O75808 1086 aa22.26■■□□□ 1.15
ECHDC1-216ENST00000479525 CST9Q5W186 159 aa22.26■■□□□ 1.15
ECHDC1-216ENST00000479525 TTLL11Q8NHH1 800 aa22.26■■□□□ 1.15
ECHDC1-216ENST00000479525 EYA3Q99504 573 aa22.26■■□□□ 1.15
ECHDC1-216ENST00000479525 FOXN1O15353 648 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 DEFB115Q30KQ5 88 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 ZC3H12CQ9C0D7 883 aaKnown RBP22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 ZNF646O15015 1829 aaPredicted RBP22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 A0A1B0GUL6 1792 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 G3V3G9 751 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 DCAF8Q5TAQ9 597 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
ECHDC1-216ENST00000479525 RASSF10A6NK89 507 aa22.24■■□□□ 1.15
ECHDC1-216ENST00000479525 CYP4F22Q6NT55 531 aa22.24■■□□□ 1.15
ECHDC1-216ENST00000479525 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
ECHDC1-216ENST00000479525 PODXL2Q9NZ53 605 aa22.24■■□□□ 1.15
ECHDC1-216ENST00000479525 H7C1D1 291 aa22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 H7C1W4 665 aa22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 ASTN2O75129 1339 aaPredicted RBP22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 CELF2O95319 508 aaKnown RBP22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 HSP90B1P14625 803 aaKnown RBP22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 GCKRQ14397 625 aa22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 FAM161AQ3B820 660 aa22.23■■□□□ 1.15
ECHDC1-216ENST00000479525 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
ECHDC1-216ENST00000479525 USP48Q86UV5 1035 aa22.22■■□□□ 1.15
ECHDC1-216ENST00000479525 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
ECHDC1-216ENST00000479525 XDHP47989 1333 aa22.21■■□□□ 1.15
ECHDC1-216ENST00000479525 CASP7P55210 303 aa22.21■■□□□ 1.15
ECHDC1-216ENST00000479525 CDC5LQ99459 802 aaKnown RBP22.21■■□□□ 1.15
ECHDC1-216ENST00000479525 MINPP1Q9UNW1 487 aa22.21■■□□□ 1.15
ECHDC1-216ENST00000479525 MXD3Q9BW11 206 aa22.2■■□□□ 1.14
ECHDC1-216ENST00000479525 ADM5C9JUS6 153 aa22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 AOC2O75106 756 aa22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 ITGA6P23229 1130 aa22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 FBXW7Q969H0 707 aa22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 CAPNS2Q96L46 248 aa22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
ECHDC1-216ENST00000479525 THSD7BQ9C0I4 1608 aa22.18■■□□□ 1.14
ECHDC1-216ENST00000479525 SNAP23O00161 211 aa22.18■■□□□ 1.14
ECHDC1-216ENST00000479525 KLRK1P26718 216 aa22.18■■□□□ 1.14
ECHDC1-216ENST00000479525 TXNRD3Q86VQ6 643 aa22.18■■□□□ 1.14
ECHDC1-216ENST00000479525 DPF2Q92785 391 aa22.18■■□□□ 1.14
ECHDC1-216ENST00000479525 CHMP3Q9Y3E7 222 aa22.18■■□□□ 1.14
ECHDC1-216ENST00000479525 ATP2B4P23634 1241 aa22.17■■□□□ 1.14
ECHDC1-216ENST00000479525 LINS1Q8NG48 757 aa22.17■■□□□ 1.14
ECHDC1-216ENST00000479525 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
ECHDC1-216ENST00000479525 PGAP2Q9UHJ9 254 aa22.17■■□□□ 1.14
ECHDC1-216ENST00000479525 TLL2Q9Y6L7 1015 aa22.17■■□□□ 1.14
ECHDC1-216ENST00000479525 VIL1P09327 827 aaKnown RBP22.16■■□□□ 1.14
ECHDC1-216ENST00000479525 CCT4P50991 539 aaKnown RBP22.16■■□□□ 1.14
ECHDC1-216ENST00000479525 KIF4BQ2VIQ3 1234 aa22.16■■□□□ 1.14
ECHDC1-216ENST00000479525 BSDC1Q9NW68 430 aaPredicted RBP22.16■■□□□ 1.14
ECHDC1-216ENST00000479525 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
ECHDC1-216ENST00000479525 BEND3Q5T5X7 828 aa22.15■■□□□ 1.14
ECHDC1-216ENST00000479525 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
ECHDC1-216ENST00000479525 AIDAQ96BJ3 306 aa22.15■■□□□ 1.14
ECHDC1-216ENST00000479525 WBP1LQ9NX94 342 aa22.15■■□□□ 1.14
ECHDC1-216ENST00000479525 TSKSQ9UJT2 592 aa22.15■■□□□ 1.14
ECHDC1-216ENST00000479525 LBX1P52954 281 aa22.14■■□□□ 1.14
ECHDC1-216ENST00000479525 EPHA10Q5JZY3 1008 aa22.14■■□□□ 1.14
ECHDC1-216ENST00000479525 RSBN1LQ6PCB5 846 aaPredicted RBP22.14■■□□□ 1.14
ECHDC1-216ENST00000479525 CDC37L1Q7L3B6 337 aa22.14■■□□□ 1.14
ECHDC1-216ENST00000479525 HELBQ8NG08 1087 aaPredicted RBP22.14■■□□□ 1.14
ECHDC1-216ENST00000479525 GGA3Q9NZ52 723 aa22.14■■□□□ 1.14
ECHDC1-216ENST00000479525 RPS12P25398 132 aaKnown RBP22.13■■□□□ 1.13
ECHDC1-216ENST00000479525 KRT26Q7Z3Y9 468 aa22.13■■□□□ 1.13
ECHDC1-216ENST00000479525 ZC3H15Q8WU90 426 aaKnown RBP22.13■■□□□ 1.13
ECHDC1-216ENST00000479525 PLA2G12BQ9BX93 195 aa22.13■■□□□ 1.13
ECHDC1-216ENST00000479525 ZNF521Q96K83 1311 aa22.13■■□□□ 1.13
ECHDC1-216ENST00000479525 TAF5LO75529 589 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms