RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 ZNF296Q8WUU4 475 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 EHD4Q9H223 541 aa10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 EGFRP00533 1210 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 MSX1P28360 303 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 FCGRTP55899 365 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 MAP3K11Q16584 847 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 ANKS3Q6ZW76 656 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 PRICKLE2Q7Z3G6 844 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 ZNF598Q86UK7 904 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 CWC22Q9HCG8 908 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-217ENST00000479511 KLF4O43474 513 aa10.62□□□□□ -0.71
GAPVD1-217ENST00000479511 FBXO24O75426 580 aa10.62□□□□□ -0.71
GAPVD1-217ENST00000479511 HSD3B2P26439 372 aa10.62□□□□□ -0.71
GAPVD1-217ENST00000479511 MKL1Q969V6 931 aa10.62□□□□□ -0.71
GAPVD1-217ENST00000479511 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-217ENST00000479511 KANSL3Q9P2N6 904 aa10.62□□□□□ -0.71
GAPVD1-217ENST00000479511 A0A1W2PNR3 127 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 GARTP22102 1010 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 SOX9P48436 509 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 PWP1Q13610 501 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 FBXL19Q6PCT2 694 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 PMEPA1Q969W9 287 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 OXCT2Q9BYC2 517 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 TRAK1Q9UPV9 953 aa10.61□□□□□ -0.71
GAPVD1-217ENST00000479511 EPB42P16452 691 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 SMPD1P17405 629 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 FAM160A1Q05DH4 1040 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 PTPROQ16827 1216 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 TTC39BQ5VTQ0 682 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 PRPF40BQ6NWY9 871 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 RNF217Q8TC41 542 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 RHOVQ96L33 236 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 RNPC3Q96LT9 517 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 ABCB6Q9NP58 842 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 KCNQ5Q9NR82 932 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 PPP4R2Q9NY27 417 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 SALL4Q9UJQ4 1053 aa10.6□□□□□ -0.71
GAPVD1-217ENST00000479511 TTC24A2A3L6 582 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 RHOQP17081 205 aa10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 PHC3Q8NDX5 983 aa10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 HNRNPLLQ8WVV9 542 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 NT5C1AQ9BXI3 368 aa10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 ZCCHC2Q9C0B9 1178 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 SIRPGQ9P1W8 387 aa10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 AKAP2Q9Y2D5 859 aa10.59□□□□□ -0.71
GAPVD1-217ENST00000479511 TMEM238LA0A1B0GVL6 79 aa10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 ANKRD24Q8TF21 1146 aa10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 HPS1Q92902 700 aa10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 SRPK1Q96SB4 655 aaKnown RBP10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 PPM1HQ9ULR3 514 aa10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 TLR6Q9Y2C9 796 aa10.58□□□□□ -0.72
GAPVD1-217ENST00000479511 CECR2Q9BXF3 1484 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 FAM221BA6H8Z2 402 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 GREM1O60565 184 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 RAB11FIP3O75154 756 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 SASH3O75995 380 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 RAB33AQ14088 237 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 SV2BQ7L1I2 683 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 KCNB2Q92953 911 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 TCF12Q99081 682 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 TIMMDC1Q9NPL8 285 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 SNTG2Q9NY99 539 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 UBP1Q9NZI7 540 aa10.57□□□□□ -0.72
GAPVD1-217ENST00000479511 A0A1B0GTH6 734 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 ENPP3O14638 875 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 PF4P02776 101 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 CELA3AP09093 270 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 EDN3P14138 238 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 LYSMD3Q7Z3D4 306 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 BRD7Q9NPI1 651 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 STRIP2Q9ULQ0 834 aa10.56□□□□□ -0.72
GAPVD1-217ENST00000479511 GDF9O60383 454 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 CRKP46108 304 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 RASA3Q14644 834 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 DTHD1Q6ZMT9 781 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 CYP4X1Q8N118 509 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 TRIM55Q9BYV6 548 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 LIN7BQ9HAP6 207 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
GAPVD1-217ENST00000479511 MMP20O60882 483 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 ACPPP15309 386 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 TARSP26639 723 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 LIG3P49916 1009 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 PCNX4Q63HM2 1172 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 OR13H1Q8NG92 308 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 DEPDC7Q96QD5 511 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 C11orf16Q9NQ32 467 aa10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-217ENST00000479511 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
GAPVD1-217ENST00000479511 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms