RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
ITSN1-228ENST00000479424 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
ITSN1-228ENST00000479424 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
ITSN1-228ENST00000479424 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
ITSN1-228ENST00000479424 FAM155AB1AL88 458 aaPredicted RBP11.15□□□□□ -0.62
ITSN1-228ENST00000479424 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
ITSN1-228ENST00000479424 VIL1P09327 827 aaKnown RBP11.15□□□□□ -0.62
ITSN1-228ENST00000479424 JARID2Q92833 1246 aaPredicted RBP11.15□□□□□ -0.62
ITSN1-228ENST00000479424 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
ITSN1-228ENST00000479424 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
ITSN1-228ENST00000479424 ASTN2O75129 1339 aaPredicted RBP11.14□□□□□ -0.63
ITSN1-228ENST00000479424 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 ELL2O00472 640 aaPredicted RBP11.14□□□□□ -0.63
ITSN1-228ENST00000479424 APAF1O14727 1248 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
ITSN1-228ENST00000479424 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 RIC3Q7Z5B4 369 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 C8orf58Q8NAV2 365 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 MYD88Q99836 296 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
ITSN1-228ENST00000479424 IFT57Q9NWB7 429 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 CACNA1FO60840 1977 aa11.14□□□□□ -0.63
ITSN1-228ENST00000479424 ZNF609O15014 1411 aa11.13□□□□□ -0.63
ITSN1-228ENST00000479424 WTIPA6NIX2 430 aaPredicted RBP11.13□□□□□ -0.63
ITSN1-228ENST00000479424 CA12O43570 354 aa11.13□□□□□ -0.63
ITSN1-228ENST00000479424 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
ITSN1-228ENST00000479424 RGS19P49795 217 aa11.13□□□□□ -0.63
ITSN1-228ENST00000479424 HUNKP57058 714 aa11.13□□□□□ -0.63
ITSN1-228ENST00000479424 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
ITSN1-228ENST00000479424 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
ITSN1-228ENST00000479424 EYA3Q99504 573 aa11.13□□□□□ -0.63
ITSN1-228ENST00000479424 PDE8AO60658 829 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 UFL1O94874 794 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 ZNF280AP59817 542 aaPredicted RBP11.12□□□□□ -0.63
ITSN1-228ENST00000479424 GOLGA2Q08379 1002 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 NOGQ13253 232 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 TSPYL6Q8N831 410 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 CCDC191Q8NCU4 936 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 GMLQ99445 158 aa11.12□□□□□ -0.63
ITSN1-228ENST00000479424 CCDC85CA6NKD9 419 aa11.11□□□□□ -0.63
ITSN1-228ENST00000479424 GNAI1P63096 354 aa11.11□□□□□ -0.63
ITSN1-228ENST00000479424 RGMBQ6NW40 437 aa11.11□□□□□ -0.63
ITSN1-228ENST00000479424 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
ITSN1-228ENST00000479424 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-228ENST00000479424 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-228ENST00000479424 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
ITSN1-228ENST00000479424 MCOLN1Q9GZU1 580 aa11.11□□□□□ -0.63
ITSN1-228ENST00000479424 GBA2Q9HCG7 927 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-228ENST00000479424 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-228ENST00000479424 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
ITSN1-228ENST00000479424 CENPFP49454 3210 aa11.11□□□□□ -0.63
ITSN1-228ENST00000479424 PDE4DIPQ5VU43 2346 aa11.1□□□□□ -0.63
ITSN1-228ENST00000479424 IGKV5-2P06315 115 aa11.1□□□□□ -0.63
ITSN1-228ENST00000479424 CCDC152Q4G0S7 254 aa11.1□□□□□ -0.63
ITSN1-228ENST00000479424 RSBN1LQ6PCB5 846 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-228ENST00000479424 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
ITSN1-228ENST00000479424 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
ITSN1-228ENST00000479424 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 PAPPA2Q9BXP8 1791 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 SLC10A3P09131 477 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 KIF23Q02241 960 aaPredicted RBP11.09□□□□□ -0.63
ITSN1-228ENST00000479424 SCARF1Q14162 830 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 C2orf69Q8N8R5 385 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 CDCA5Q96FF9 252 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 MAP3K2Q9Y2U5 619 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 HTTP42858 3142 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
ITSN1-228ENST00000479424 XDHP47989 1333 aa11.09□□□□□ -0.63
ITSN1-228ENST00000479424 PI4KAP2A4QPH2 592 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
ITSN1-228ENST00000479424 ATP2B4P23634 1241 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 ZNF157P51786 506 aaPredicted RBP11.08□□□□□ -0.64
ITSN1-228ENST00000479424 CTSWP56202 376 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 DGKZQ13574 1117 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 CCDC184Q52MB2 194 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
ITSN1-228ENST00000479424 CCDC30Q5VVM6 783 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 G2E3Q7L622 706 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 ANKRD18AQ8IVF6 992 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 PI4KAP1Q8N8J0 262 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 TSR2Q969E8 191 aaKnown RBP11.08□□□□□ -0.64
ITSN1-228ENST00000479424 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 RNF186Q9NXI6 227 aa11.08□□□□□ -0.64
ITSN1-228ENST00000479424 SCAF8Q9UPN6 1271 aaKnown RBP11.08□□□□□ -0.64
ITSN1-228ENST00000479424 CALD1Q05682 793 aaKnown RBP11.07□□□□□ -0.64
ITSN1-228ENST00000479424 CWF19L2Q2TBE0 894 aaKnown RBP11.07□□□□□ -0.64
ITSN1-228ENST00000479424 KSR2Q6VAB6 950 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 RASAL3Q86YV0 1011 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 GREM2Q9H772 168 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 MYOZ2Q9NPC6 264 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 SAGE1Q9NXZ1 904 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
ITSN1-228ENST00000479424 MED23Q9ULK4 1368 aa11.06□□□□□ -0.64
ITSN1-228ENST00000479424 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms