RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 DBNDD1Q9H9R9 158 aa26.05■■□□□ 1.76
TRIM8-203ENST00000479004 UBE3BQ7Z3V4 1068 aa26.04■■□□□ 1.76
TRIM8-203ENST00000479004 LINS1Q8NG48 757 aa26.04■■□□□ 1.76
TRIM8-203ENST00000479004 ANKIB1Q9P2G1 1089 aa26.04■■□□□ 1.76
TRIM8-203ENST00000479004 CASP7P55210 303 aa26.03■■□□□ 1.76
TRIM8-203ENST00000479004 CDC5LQ99459 802 aaKnown RBP26.03■■□□□ 1.76
TRIM8-203ENST00000479004 PLA2G12BQ9BX93 195 aa26.03■■□□□ 1.76
TRIM8-203ENST00000479004 ZC3H12CQ9C0D7 883 aaKnown RBP26.03■■□□□ 1.76
TRIM8-203ENST00000479004 GREM2Q9H772 168 aa26.03■■□□□ 1.76
TRIM8-203ENST00000479004 GGA1Q9UJY5 639 aa26.03■■□□□ 1.76
TRIM8-203ENST00000479004 RTL9Q8NET4 1388 aa26.03■■□□□ 1.76
TRIM8-203ENST00000479004 ECE2O60344 883 aa26.02■■□□□ 1.76
TRIM8-203ENST00000479004 UFL1O94874 794 aa26.02■■□□□ 1.76
TRIM8-203ENST00000479004 DOK7Q18PE1 504 aa26.02■■□□□ 1.76
TRIM8-203ENST00000479004 MKRN1Q9UHC7 482 aaKnown RBP26.02■■□□□ 1.76
TRIM8-203ENST00000479004 PSMD14O00487 310 aa26.01■■□□□ 1.75
TRIM8-203ENST00000479004 CNOT7Q9UIV1 285 aaKnown RBP26.01■■□□□ 1.75
TRIM8-203ENST00000479004 SPEF2Q9C093 1822 aa26■■□□□ 1.75
TRIM8-203ENST00000479004 CNTNAP1P78357 1384 aa26■■□□□ 1.75
TRIM8-203ENST00000479004 XDHP47989 1333 aa26■■□□□ 1.75
TRIM8-203ENST00000479004 ZBTB12Q9Y330 459 aaPredicted RBP26■■□□□ 1.75
TRIM8-203ENST00000479004 DPF2Q92785 391 aa25.99■■□□□ 1.75
TRIM8-203ENST00000479004 KCNQ5Q9NR82 932 aa25.99■■□□□ 1.75
TRIM8-203ENST00000479004 BSDC1Q9NW68 430 aaPredicted RBP25.99■■□□□ 1.75
TRIM8-203ENST00000479004 F6X3S4 739 aa25.98■■□□□ 1.75
TRIM8-203ENST00000479004 ATP2B4P23634 1241 aa25.98■■□□□ 1.75
TRIM8-203ENST00000479004 BEND3Q5T5X7 828 aa25.98■■□□□ 1.75
TRIM8-203ENST00000479004 PGAP2Q9UHJ9 254 aa25.98■■□□□ 1.75
TRIM8-203ENST00000479004 SCN9AQ15858 1988 aa25.98■■□□□ 1.75
TRIM8-203ENST00000479004 SHTN1A0MZ66 631 aa25.97■■□□□ 1.75
TRIM8-203ENST00000479004 H7C1D1 291 aa25.97■■□□□ 1.75
TRIM8-203ENST00000479004 CSF1RP07333 972 aa25.97■■□□□ 1.75
TRIM8-203ENST00000479004 HIRAP54198 1017 aaPredicted RBP25.97■■□□□ 1.75
TRIM8-203ENST00000479004 MINPP1Q9UNW1 487 aa25.97■■□□□ 1.75
TRIM8-203ENST00000479004 TRPM7Q96QT4 1865 aa25.96■■□□□ 1.75
TRIM8-203ENST00000479004 FMR1Q06787 632 aaKnown RBP eCLIP25.96■■□□□ 1.75
TRIM8-203ENST00000479004 MICALL2Q8IY33 904 aa25.96■■□□□ 1.75
TRIM8-203ENST00000479004 TRPM4Q8TD43 1214 aa25.96■■□□□ 1.75
TRIM8-203ENST00000479004 G3V3G9 751 aa25.95■■□□□ 1.74
TRIM8-203ENST00000479004 RPS12P25398 132 aaKnown RBP25.95■■□□□ 1.74
TRIM8-203ENST00000479004 DCAF8Q5TAQ9 597 aa25.95■■□□□ 1.74
TRIM8-203ENST00000479004 ZC3H15Q8WU90 426 aaKnown RBP25.95■■□□□ 1.74
TRIM8-203ENST00000479004 TRAF5O00463 557 aa25.94■■□□□ 1.74
TRIM8-203ENST00000479004 VIL1P09327 827 aaKnown RBP25.94■■□□□ 1.74
TRIM8-203ENST00000479004 ITGA6P23229 1130 aa25.94■■□□□ 1.74
TRIM8-203ENST00000479004 IGHMBP2P38935 993 aaKnown RBP25.94■■□□□ 1.74
TRIM8-203ENST00000479004 PSME4Q14997 1843 aa25.93■■□□□ 1.74
TRIM8-203ENST00000479004 RASSF10A6NK89 507 aa25.93■■□□□ 1.74
TRIM8-203ENST00000479004 HSPA1AP0DMV8 641 aaKnown RBP25.93■■□□□ 1.74
TRIM8-203ENST00000479004 HSPA1BP0DMV9 641 aaKnown RBP25.93■■□□□ 1.74
TRIM8-203ENST00000479004 FAM161AQ3B820 660 aa25.93■■□□□ 1.74
TRIM8-203ENST00000479004 WTIPA6NIX2 430 aaPredicted RBP25.92■■□□□ 1.74
TRIM8-203ENST00000479004 E9PSI1 815 aa25.92■■□□□ 1.74
TRIM8-203ENST00000479004 VEGFBP49765 207 aa25.92■■□□□ 1.74
TRIM8-203ENST00000479004 DEFB115Q30KQ5 88 aa25.92■■□□□ 1.74
TRIM8-203ENST00000479004 CCT4P50991 539 aaKnown RBP25.91■■□□□ 1.74
TRIM8-203ENST00000479004 IFFO2Q5TF58 517 aa25.91■■□□□ 1.74
TRIM8-203ENST00000479004 CST9Q5W186 159 aa25.91■■□□□ 1.74
TRIM8-203ENST00000479004 SAMD7Q7Z3H4 446 aa25.91■■□□□ 1.74
TRIM8-203ENST00000479004 FOXO4P98177 505 aa25.9■■□□□ 1.74
TRIM8-203ENST00000479004 GLIS2Q9BZE0 524 aaPredicted RBP25.9■■□□□ 1.74
TRIM8-203ENST00000479004 ABT1Q9ULW3 272 aaKnown RBP25.9■■□□□ 1.74
TRIM8-203ENST00000479004 MED23Q9ULK4 1368 aa25.9■■□□□ 1.74
TRIM8-203ENST00000479004 SLFN5Q08AF3 891 aa25.89■■□□□ 1.74
TRIM8-203ENST00000479004 PODNQ7Z5L7 613 aa25.89■■□□□ 1.74
TRIM8-203ENST00000479004 MPHOSPH8Q99549 860 aa25.89■■□□□ 1.74
TRIM8-203ENST00000479004 LEMD3Q9Y2U8 911 aa25.89■■□□□ 1.74
TRIM8-203ENST00000479004 ZNF609O15014 1411 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 ANKRD18BA2A2Z9 1011 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 GRM8O00222 908 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 ALDH1L1O75891 902 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 EGFRP00533 1210 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 TBC1D10BQ4KMP7 808 aaPredicted RBP25.88■■□□□ 1.73
TRIM8-203ENST00000479004 CDC37L1Q7L3B6 337 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 MRPL50Q8N5N7 158 aaKnown RBP25.88■■□□□ 1.73
TRIM8-203ENST00000479004 ANKRD2Q9GZV1 360 aa25.88■■□□□ 1.73
TRIM8-203ENST00000479004 RSBN1LQ6PCB5 846 aaPredicted RBP25.87■■□□□ 1.73
TRIM8-203ENST00000479004 SLC4A10Q6U841 1118 aa25.87■■□□□ 1.73
TRIM8-203ENST00000479004 AGBL3Q8NEM8 1001 aa25.87■■□□□ 1.73
TRIM8-203ENST00000479004 SRCIN1Q9C0H9 1055 aa25.86■■□□□ 1.73
TRIM8-203ENST00000479004 POLR2AP24928 1970 aaKnown RBP25.86■■□□□ 1.73
TRIM8-203ENST00000479004 USP17L3A6NCW0 530 aa25.85■■□□□ 1.73
TRIM8-203ENST00000479004 USP17L4A6NCW7 530 aa25.85■■□□□ 1.73
TRIM8-203ENST00000479004 IFIT5Q13325 482 aaKnown RBP25.85■■□□□ 1.73
TRIM8-203ENST00000479004 EPHA10Q5JZY3 1008 aa25.85■■□□□ 1.73
TRIM8-203ENST00000479004 RBM26Q5T8P6 1007 aaKnown RBP25.85■■□□□ 1.73
TRIM8-203ENST00000479004 USP17L1Q7RTZ2 530 aa25.85■■□□□ 1.73
TRIM8-203ENST00000479004 C9orf78Q9NZ63 289 aaPredicted RBP25.85■■□□□ 1.73
TRIM8-203ENST00000479004 TLL2Q9Y6L7 1015 aa25.85■■□□□ 1.73
TRIM8-203ENST00000479004 ZNF804BA4D1E1 1349 aa25.85■■□□□ 1.73
TRIM8-203ENST00000479004 CELF2O95319 508 aaKnown RBP25.84■■□□□ 1.73
TRIM8-203ENST00000479004 CHRNDQ07001 517 aa25.84■■□□□ 1.73
TRIM8-203ENST00000479004 COL13A1Q5TAT6 717 aaPredicted RBP25.84■■□□□ 1.73
TRIM8-203ENST00000479004 LMBR1LQ6UX01 489 aa25.84■■□□□ 1.73
TRIM8-203ENST00000479004 GMLQ99445 158 aa25.84■■□□□ 1.73
TRIM8-203ENST00000479004 WDR33Q9C0J8 1336 aaKnown RBP25.84■■□□□ 1.73
TRIM8-203ENST00000479004 ZNF280AP59817 542 aaPredicted RBP25.83■■□□□ 1.73
TRIM8-203ENST00000479004 KIF4BQ2VIQ3 1234 aa25.83■■□□□ 1.73
TRIM8-203ENST00000479004 USP48Q86UV5 1035 aa25.83■■□□□ 1.73
TRIM8-203ENST00000479004 TXNRD3Q86VQ6 643 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms