RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SYNJ1O43426 1573 aa8.7□□□□□ -1.02
CCDC171-207ENST00000478913 KRTAP9-6A0A140TA67 174 aa8.7□□□□□ -1.02
CCDC171-207ENST00000478913 ADAMTS2O95450 1211 aa8.7□□□□□ -1.02
CCDC171-207ENST00000478913 ADH6P28332 368 aa8.7□□□□□ -1.02
CCDC171-207ENST00000478913 MFAP1P55081 439 aaKnown RBP8.7□□□□□ -1.02
CCDC171-207ENST00000478913 TTC39BQ5VTQ0 682 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-207ENST00000478913 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
CCDC171-207ENST00000478913 ABI2Q9NYB9 513 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-207ENST00000478913 ZFATQ9P243 1243 aa8.7□□□□□ -1.02
CCDC171-207ENST00000478913 DIP2BQ9P265 1576 aa8.69□□□□□ -1.02
CCDC171-207ENST00000478913 GPR182O15218 404 aa8.69□□□□□ -1.02
CCDC171-207ENST00000478913 SIN3BO75182 1162 aa8.69□□□□□ -1.02
CCDC171-207ENST00000478913 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
CCDC171-207ENST00000478913 OXCT2Q9BYC2 517 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-207ENST00000478913 TMEM63CQ9P1W3 806 aa8.69□□□□□ -1.02
CCDC171-207ENST00000478913 GDF2Q9UK05 429 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-207ENST00000478913 NEURL1BA8MQ27 555 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 MMP20O60882 483 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 MAP3K6O95382 1288 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 IRS1P35568 1242 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 TBC1D8BQ0IIM8 1120 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 GOLGA6L1Q8N7Z2 621 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 SNX29Q8TEQ0 813 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
CCDC171-207ENST00000478913 RGS17Q9UGC6 210 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-207ENST00000478913 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
CCDC171-207ENST00000478913 CCDC9Q9Y3X0 531 aaKnown RBP8.68□□□□□ -1.02
CCDC171-207ENST00000478913 RNF225M0QZC1 329 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-207ENST00000478913 TNFRSF21O75509 655 aa8.67□□□□□ -1.02
CCDC171-207ENST00000478913 NEFLP07196 543 aa8.67□□□□□ -1.02
CCDC171-207ENST00000478913 PSAPP07602 524 aa8.67□□□□□ -1.02
CCDC171-207ENST00000478913 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
CCDC171-207ENST00000478913 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
CCDC171-207ENST00000478913 IGFLR1Q9H665 355 aa8.67□□□□□ -1.02
CCDC171-207ENST00000478913 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
CCDC171-207ENST00000478913 ANKRD33BA6NCL7 494 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 PHACTR2O75167 634 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 IGHA2P01877 340 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 SLURP2P0DP57 97 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
CCDC171-207ENST00000478913 SLCO4C1Q6ZQN7 724 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 TNFRSF25Q93038 417 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 ALKBH8Q96BT7 664 aaKnown RBP8.66□□□□□ -1.02
CCDC171-207ENST00000478913 KLF15Q9UIH9 416 aa8.66□□□□□ -1.02
CCDC171-207ENST00000478913 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
CCDC171-207ENST00000478913 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 TREHO43280 583 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 IGHA1P01876 353 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 ERCC3P19447 782 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 SOX18P35713 384 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 PLAURQ03405 335 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 FCHSD1Q86WN1 690 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 OR13H1Q8NG92 308 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 ACDQ96AP0 544 aa8.65□□□□□ -1.02
CCDC171-207ENST00000478913 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 NRLP54845 237 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 ORC1Q13415 861 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 PCSK7Q16549 785 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
CCDC171-207ENST00000478913 CNTN3Q9P232 1028 aa8.64□□□□□ -1.03
CCDC171-207ENST00000478913 ADAM23O75077 832 aa8.63□□□□□ -1.03
CCDC171-207ENST00000478913 CES1P23141 567 aa8.63□□□□□ -1.03
CCDC171-207ENST00000478913 ADH7P40394 386 aa8.63□□□□□ -1.03
CCDC171-207ENST00000478913 MAPK8P45983 427 aa8.63□□□□□ -1.03
CCDC171-207ENST00000478913 GPLD1P80108 840 aa8.63□□□□□ -1.03
CCDC171-207ENST00000478913 PMEPA1Q969W9 287 aa8.63□□□□□ -1.03
CCDC171-207ENST00000478913 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 CPNE3O75131 537 aaKnown RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 ITGB2P05107 769 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 CYP2E1P05181 493 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 EPXP11678 715 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 HOXD8P13378 290 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 MLLT1Q03111 559 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 FMR1Q06787 632 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 DSC3Q14574 896 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 TRPM4Q8TD43 1214 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 NSUN5Q96P11 429 aaKnown RBP8.62□□□□□ -1.03
CCDC171-207ENST00000478913 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
CCDC171-207ENST00000478913 EIF1AYO14602 144 aaKnown RBP8.61□□□□□ -1.03
CCDC171-207ENST00000478913 EREGO14944 169 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 CELA2BP08218 269 aaPredicted RBP8.61□□□□□ -1.03
CCDC171-207ENST00000478913 BCRP11274 1271 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 ALAS2P22557 587 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 PIP4K2BP78356 416 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 HYAL2Q12891 473 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 NPAS4Q8IUM7 802 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 EDARADDQ8WWZ3 215 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 CSRNP1Q96S65 589 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 DNAJC25Q9H1X3 360 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms