RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 GRAPLQ8TC17 118 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-217ENST00000478743 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
HDAC8-217ENST00000478743 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
HDAC8-217ENST00000478743 MYCP01106 439 aaPredicted RBP16.48■□□□□ 0.23
HDAC8-217ENST00000478743 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
HDAC8-217ENST00000478743 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 SLC10A5Q5PT55 438 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 KIF6Q6ZMV9 814 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
HDAC8-217ENST00000478743 IGF2BP3O00425 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDAC8-217ENST00000478743 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
HDAC8-217ENST00000478743 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
HDAC8-217ENST00000478743 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
HDAC8-217ENST00000478743 PITPNM2Q9BZ72 1349 aa16.46■□□□□ 0.23
HDAC8-217ENST00000478743 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
HDAC8-217ENST00000478743 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
HDAC8-217ENST00000478743 GPSM2P81274 684 aa16.46■□□□□ 0.23
HDAC8-217ENST00000478743 PRKG1Q13976 671 aa16.46■□□□□ 0.23
HDAC8-217ENST00000478743 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
HDAC8-217ENST00000478743 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
HDAC8-217ENST00000478743 COL25A1Q9BXS0 654 aaPredicted RBP16.46■□□□□ 0.23
HDAC8-217ENST00000478743 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
HDAC8-217ENST00000478743 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
HDAC8-217ENST00000478743 IFNL1Q8IU54 200 aa16.45■□□□□ 0.22
HDAC8-217ENST00000478743 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
HDAC8-217ENST00000478743 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
HDAC8-217ENST00000478743 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
HDAC8-217ENST00000478743 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
HDAC8-217ENST00000478743 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
HDAC8-217ENST00000478743 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
HDAC8-217ENST00000478743 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
HDAC8-217ENST00000478743 TMEM106CQ9BVX2 250 aa16.43■□□□□ 0.22
HDAC8-217ENST00000478743 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
HDAC8-217ENST00000478743 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
HDAC8-217ENST00000478743 CRHR2Q13324 411 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 SHISA4Q96DD7 197 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
HDAC8-217ENST00000478743 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 MYOZ2Q9NPC6 264 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
HDAC8-217ENST00000478743 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
HDAC8-217ENST00000478743 GMLQ99445 158 aa16.41■□□□□ 0.22
HDAC8-217ENST00000478743 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
HDAC8-217ENST00000478743 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
HDAC8-217ENST00000478743 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
HDAC8-217ENST00000478743 SLC4A8Q2Y0W8 1093 aa16.4■□□□□ 0.22
HDAC8-217ENST00000478743 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-217ENST00000478743 TBC1D16Q8TBP0 767 aa16.4■□□□□ 0.22
HDAC8-217ENST00000478743 OTOFQ9HC10 1997 aa16.39■□□□□ 0.21
HDAC8-217ENST00000478743 ALDH1A1P00352 501 aa16.39■□□□□ 0.21
HDAC8-217ENST00000478743 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
HDAC8-217ENST00000478743 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
HDAC8-217ENST00000478743 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
HDAC8-217ENST00000478743 VCANP13611 3396 aa16.38■□□□□ 0.21
HDAC8-217ENST00000478743 ANXA1P04083 346 aa16.38■□□□□ 0.21
HDAC8-217ENST00000478743 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
HDAC8-217ENST00000478743 SLC9C1Q4G0N8 1177 aa16.38■□□□□ 0.21
HDAC8-217ENST00000478743 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
HDAC8-217ENST00000478743 SH3TC2Q8TF17 1288 aa16.38■□□□□ 0.21
HDAC8-217ENST00000478743 GJA5P36382 358 aa16.37■□□□□ 0.21
HDAC8-217ENST00000478743 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
HDAC8-217ENST00000478743 DPF3Q92784 378 aa16.37■□□□□ 0.21
HDAC8-217ENST00000478743 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
HDAC8-217ENST00000478743 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
HDAC8-217ENST00000478743 Q7L0L9 218 aa16.36■□□□□ 0.21
HDAC8-217ENST00000478743 AGBL3Q8NEM8 1001 aa16.36■□□□□ 0.21
HDAC8-217ENST00000478743 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
HDAC8-217ENST00000478743 ANGEL1Q9UNK9 670 aaKnown RBP16.36■□□□□ 0.21
HDAC8-217ENST00000478743 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 SASH1O94885 1247 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 HSPA5P11021 654 aaKnown RBP16.35■□□□□ 0.21
HDAC8-217ENST00000478743 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
HDAC8-217ENST00000478743 SP3Q02447 781 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 PDIA6Q15084 440 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
HDAC8-217ENST00000478743 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 EYA3Q99504 573 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 PTPN18Q99952 460 aa16.35■□□□□ 0.21
HDAC8-217ENST00000478743 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
HDAC8-217ENST00000478743 ARMC9Q7Z3E5 817 aa16.34■□□□□ 0.21
HDAC8-217ENST00000478743 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
HDAC8-217ENST00000478743 WNT10BO00744 389 aa16.33■□□□□ 0.2
HDAC8-217ENST00000478743 NF2P35240 595 aa16.33■□□□□ 0.2
HDAC8-217ENST00000478743 MTFR1Q15390 333 aa16.33■□□□□ 0.2
HDAC8-217ENST00000478743 ARHGAP39Q9C0H5 1083 aa16.33■□□□□ 0.2
HDAC8-217ENST00000478743 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.2
HDAC8-217ENST00000478743 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
HDAC8-217ENST00000478743 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-217ENST00000478743 UFL1O94874 794 aa16.32■□□□□ 0.2
HDAC8-217ENST00000478743 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-217ENST00000478743 UBE2Q1Q7Z7E8 422 aa16.32■□□□□ 0.2
HDAC8-217ENST00000478743 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms