RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
SCAMP3-206ENST00000478737 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
SCAMP3-206ENST00000478737 XDHP47989 1333 aa12.56□□□□□ -0.4
SCAMP3-206ENST00000478737 IQCA1LA6NCM1 817 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 BCAR3O75815 825 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 CXCL9Q07325 125 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 INTS3Q68E01 1043 aaKnown RBP12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 SUCLG2Q96I99 432 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 EYA3Q99504 573 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 ANKIB1Q9P2G1 1089 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
SCAMP3-206ENST00000478737 DICER1Q9UPY3 1922 aaKnown RBP12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 YDJCA8MPS7 323 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 FSTL1Q12841 308 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 FRAT1Q92837 279 aaPredicted RBP12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 DUOX1Q9NRD9 1551 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
SCAMP3-206ENST00000478737 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 WTIPA6NIX2 430 aaPredicted RBP12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 UFL1O94874 794 aa12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 TRIM27P14373 513 aa12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 TAF1DQ9H5J8 278 aaPredicted RBP12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
SCAMP3-206ENST00000478737 WDR90Q96KV7 1748 aa12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 SCNN1DP51172 638 aa12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 TNIP1Q15025 636 aa12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 HACL1Q9UJ83 578 aa12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 CCDC88AQ3V6T2 1871 aa12.52□□□□□ -0.41
SCAMP3-206ENST00000478737 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 CHRNDQ07001 517 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 ZKSCAN2Q63HK3 967 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 LDHAL6AQ6ZMR3 332 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 PODNQ7Z5L7 613 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 PNMA8AQ86V59 439 aaPredicted RBP12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 GPR101Q96P66 508 aaPredicted RBP12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 RIPOR2Q9Y4F9 1068 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
SCAMP3-206ENST00000478737 ECE2O60344 883 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 HSPA6P17066 643 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 EPHX2P34913 555 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 DPF2Q92785 391 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 DBNDD1Q9H9R9 158 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 ZNF804BA4D1E1 1349 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 MED23Q9ULK4 1368 aa12.5□□□□□ -0.41
SCAMP3-206ENST00000478737 TIAM2Q8IVF5 1701 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 RAD17O75943 681 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 UBTFL1P0CB47 393 aaPredicted RBP12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 EPS15P42566 896 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 TXNRD3Q86VQ6 643 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 FTSJ3Q8IY81 847 aaKnown RBP12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 TNNQ9UQP3 1299 aa12.49□□□□□ -0.41
SCAMP3-206ENST00000478737 PSMD14O00487 310 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 GNAI3P08754 354 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 RPS12P25398 132 aaKnown RBP12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 GMPSP49915 693 aaPredicted RBP12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 USP50Q70EL3 339 aaPredicted RBP12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 MEIS3Q99687 375 aa12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 PUS3Q9BZE2 481 aaKnown RBP12.48□□□□□ -0.41
SCAMP3-206ENST00000478737 TAF5LO75529 589 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 MTX1Q13505 466 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 GMLQ99445 158 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 CNNM1Q9NRU3 951 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 PGAP2Q9UHJ9 254 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
SCAMP3-206ENST00000478737 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms