RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
PRKCD-204ENST00000477794 SULF1Q8IWU6 871 aa24.1■■□□□ 1.45
PRKCD-204ENST00000477794 TBC1D16Q8TBP0 767 aa24.1■■□□□ 1.45
PRKCD-204ENST00000477794 SHTN1A0MZ66 631 aa24.09■■□□□ 1.45
PRKCD-204ENST00000477794 MLLT1Q03111 559 aaPredicted RBP24.09■■□□□ 1.45
PRKCD-204ENST00000477794 DOK7Q18PE1 504 aa24.09■■□□□ 1.45
PRKCD-204ENST00000477794 FAM161AQ3B820 660 aa24.09■■□□□ 1.45
PRKCD-204ENST00000477794 GBA2Q9HCG7 927 aaPredicted RBP24.09■■□□□ 1.45
PRKCD-204ENST00000477794 PODXL2Q9NZ53 605 aa24.09■■□□□ 1.45
PRKCD-204ENST00000477794 ADAMTS8Q9UP79 889 aa24.09■■□□□ 1.45
PRKCD-204ENST00000477794 DDX58O95786 925 aaKnown RBP24.08■■□□□ 1.45
PRKCD-204ENST00000477794 GNAI1P63096 354 aa24.08■■□□□ 1.45
PRKCD-204ENST00000477794 RBM26Q5T8P6 1007 aaKnown RBP24.08■■□□□ 1.45
PRKCD-204ENST00000477794 RGMBQ6NW40 437 aa24.08■■□□□ 1.45
PRKCD-204ENST00000477794 MBIPQ9NS73 344 aa24.08■■□□□ 1.45
PRKCD-204ENST00000477794 GGA1Q9UJY5 639 aa24.08■■□□□ 1.45
PRKCD-204ENST00000477794 DDX60Q8IY21 1712 aaKnown RBP24.07■■□□□ 1.44
PRKCD-204ENST00000477794 UFL1O94874 794 aa24.07■■□□□ 1.44
PRKCD-204ENST00000477794 KIF4BQ2VIQ3 1234 aa24.07■■□□□ 1.44
PRKCD-204ENST00000477794 CCDC191Q8NCU4 936 aa24.07■■□□□ 1.44
PRKCD-204ENST00000477794 IFT57Q9NWB7 429 aa24.07■■□□□ 1.44
PRKCD-204ENST00000477794 VIL1P09327 827 aaKnown RBP24.06■■□□□ 1.44
PRKCD-204ENST00000477794 ZNF157P51786 506 aaPredicted RBP24.05■■□□□ 1.44
PRKCD-204ENST00000477794 MCOLN1Q9GZU1 580 aa24.05■■□□□ 1.44
PRKCD-204ENST00000477794 CWC25Q9NXE8 425 aaPredicted RBP24.05■■□□□ 1.44
PRKCD-204ENST00000477794 SAGE1Q9NXZ1 904 aa24.05■■□□□ 1.44
PRKCD-204ENST00000477794 TAF1P21675 1872 aa24.04■■□□□ 1.44
PRKCD-204ENST00000477794 PDE8AO60658 829 aa24.04■■□□□ 1.44
PRKCD-204ENST00000477794 PCCAP05165 728 aaPredicted RBP24.04■■□□□ 1.44
PRKCD-204ENST00000477794 DGKZQ13574 1117 aa24.04■■□□□ 1.44
PRKCD-204ENST00000477794 AGBL3Q8NEM8 1001 aa24.04■■□□□ 1.44
PRKCD-204ENST00000477794 MYD88Q99836 296 aa24.04■■□□□ 1.44
PRKCD-204ENST00000477794 RTL9Q8NET4 1388 aa24.03■■□□□ 1.44
PRKCD-204ENST00000477794 RGS19P49795 217 aa24.03■■□□□ 1.44
PRKCD-204ENST00000477794 ANKRD18AQ8IVF6 992 aa24.03■■□□□ 1.44
PRKCD-204ENST00000477794 GGA3Q9NZ52 723 aa24.03■■□□□ 1.44
PRKCD-204ENST00000477794 ADM5C9JUS6 153 aa24.02■■□□□ 1.44
PRKCD-204ENST00000477794 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
PRKCD-204ENST00000477794 REM2Q8IYK8 340 aaPredicted RBP24.02■■□□□ 1.44
PRKCD-204ENST00000477794 XDHP47989 1333 aa24.02■■□□□ 1.44
PRKCD-204ENST00000477794 EGFRP00533 1210 aa24.01■■□□□ 1.43
PRKCD-204ENST00000477794 ZNF853P0CG23 659 aa24.01■■□□□ 1.43
PRKCD-204ENST00000477794 CDC5LQ99459 802 aaKnown RBP24.01■■□□□ 1.43
PRKCD-204ENST00000477794 SEC31BQ9NQW1 1179 aa24.01■■□□□ 1.43
PRKCD-204ENST00000477794 KCNQ5Q9NR82 932 aa24.01■■□□□ 1.43
PRKCD-204ENST00000477794 FKBP1BP68106 108 aa24■■□□□ 1.43
PRKCD-204ENST00000477794 RSBN1LQ6PCB5 846 aaPredicted RBP24■■□□□ 1.43
PRKCD-204ENST00000477794 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
PRKCD-204ENST00000477794 ZNF609O15014 1411 aa24■■□□□ 1.43
PRKCD-204ENST00000477794 ELL2O00472 640 aaPredicted RBP23.99■■□□□ 1.43
PRKCD-204ENST00000477794 ATP2B4P23634 1241 aa23.99■■□□□ 1.43
PRKCD-204ENST00000477794 ZNF280AP59817 542 aaPredicted RBP23.99■■□□□ 1.43
PRKCD-204ENST00000477794 KIF23Q02241 960 aaPredicted RBP23.99■■□□□ 1.43
PRKCD-204ENST00000477794 METTL22Q9BUU2 404 aaPredicted RBP23.99■■□□□ 1.43
PRKCD-204ENST00000477794 FAM155AB1AL88 458 aaPredicted RBP23.98■■□□□ 1.43
PRKCD-204ENST00000477794 APAF1O14727 1248 aa23.98■■□□□ 1.43
PRKCD-204ENST00000477794 USP17L8P0C7I0 530 aa23.98■■□□□ 1.43
PRKCD-204ENST00000477794 NEXNQ0ZGT2 675 aa23.98■■□□□ 1.43
PRKCD-204ENST00000477794 PODNQ7Z5L7 613 aa23.98■■□□□ 1.43
PRKCD-204ENST00000477794 USP17L3A6NCW0 530 aa23.97■■□□□ 1.43
PRKCD-204ENST00000477794 USP17L4A6NCW7 530 aa23.97■■□□□ 1.43
PRKCD-204ENST00000477794 USP17L1Q7RTZ2 530 aa23.97■■□□□ 1.43
PRKCD-204ENST00000477794 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
PRKCD-204ENST00000477794 PITPNM2Q9BZ72 1349 aa23.96■■□□□ 1.43
PRKCD-204ENST00000477794 SLC10A3P09131 477 aa23.96■■□□□ 1.43
PRKCD-204ENST00000477794 SCARF1Q14162 830 aa23.96■■□□□ 1.43
PRKCD-204ENST00000477794 ANGEL2Q5VTE6 544 aaKnown RBP23.96■■□□□ 1.43
PRKCD-204ENST00000477794 DLK2Q6UY11 383 aa23.96■■□□□ 1.43
PRKCD-204ENST00000477794 ZIC5Q96T25 663 aa23.96■■□□□ 1.43
PRKCD-204ENST00000477794 STK31Q9BXU1 1019 aa23.96■■□□□ 1.43
PRKCD-204ENST00000477794 CASP8AP2Q9UKL3 1982 aa23.95■■□□□ 1.42
PRKCD-204ENST00000477794 OGFOD1Q8N543 542 aa23.95■■□□□ 1.42
PRKCD-204ENST00000477794 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
PRKCD-204ENST00000477794 PRKRIP1Q9H875 184 aaPredicted RBP23.95■■□□□ 1.42
PRKCD-204ENST00000477794 MYOZ2Q9NPC6 264 aa23.95■■□□□ 1.42
PRKCD-204ENST00000477794 TRPA1O75762 1119 aa23.94■■□□□ 1.42
PRKCD-204ENST00000477794 CTSWP56202 376 aa23.94■■□□□ 1.42
PRKCD-204ENST00000477794 MAP3K2Q9Y2U5 619 aa23.94■■□□□ 1.42
PRKCD-204ENST00000477794 MMP14P50281 582 aa23.93■■□□□ 1.42
PRKCD-204ENST00000477794 KSR2Q6VAB6 950 aa23.93■■□□□ 1.42
PRKCD-204ENST00000477794 RNF186Q9NXI6 227 aa23.93■■□□□ 1.42
PRKCD-204ENST00000477794 MYO3BQ8WXR4 1341 aa23.92■■□□□ 1.42
PRKCD-204ENST00000477794 C8orf58Q8NAV2 365 aa23.92■■□□□ 1.42
PRKCD-204ENST00000477794 BSDC1Q9NW68 430 aaPredicted RBP23.92■■□□□ 1.42
PRKCD-204ENST00000477794 MED23Q9ULK4 1368 aa23.91■■□□□ 1.42
PRKCD-204ENST00000477794 NF2P35240 595 aa23.91■■□□□ 1.42
PRKCD-204ENST00000477794 GMLQ99445 158 aa23.91■■□□□ 1.42
PRKCD-204ENST00000477794 COL4A1P02462 1669 aa23.91■■□□□ 1.42
PRKCD-204ENST00000477794 JARID2Q92833 1246 aaPredicted RBP23.9■■□□□ 1.42
PRKCD-204ENST00000477794 CSRNP1Q96S65 589 aa23.9■■□□□ 1.42
PRKCD-204ENST00000477794 ASTN2O75129 1339 aaPredicted RBP23.89■■□□□ 1.42
PRKCD-204ENST00000477794 POLR2AP24928 1970 aaKnown RBP23.89■■□□□ 1.42
PRKCD-204ENST00000477794 SCN9AQ15858 1988 aa23.89■■□□□ 1.42
PRKCD-204ENST00000477794 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
PRKCD-204ENST00000477794 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
PRKCD-204ENST00000477794 SLC34A2O95436 690 aa23.88■■□□□ 1.41
PRKCD-204ENST00000477794 IGHMBP2P38935 993 aaKnown RBP23.88■■□□□ 1.41
PRKCD-204ENST00000477794 RASAL3Q86YV0 1011 aa23.88■■□□□ 1.41
PRKCD-204ENST00000477794 TTLL11Q8NHH1 800 aa23.88■■□□□ 1.41
PRKCD-204ENST00000477794 COA1Q9GZY4 146 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms