RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SRP68Q9UHB9 627 aaKnown RBP14.82□□□□□ -0.04
PRPF39-203ENST00000477626 ZNF804BA4D1E1 1349 aa14.82□□□□□ -0.04
PRPF39-203ENST00000477626 ADORA1P30542 326 aa14.82□□□□□ -0.04
PRPF39-203ENST00000477626 ERFEQ4G0M1 354 aa14.82□□□□□ -0.04
PRPF39-203ENST00000477626 ANAPC15P60006 121 aa14.81□□□□□ -0.04
PRPF39-203ENST00000477626 COL9A3Q14050 684 aaPredicted RBP14.81□□□□□ -0.04
PRPF39-203ENST00000477626 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
PRPF39-203ENST00000477626 A0A1B0GUL7 405 aa14.81□□□□□ -0.04
PRPF39-203ENST00000477626 SCARF1Q14162 830 aa14.81□□□□□ -0.04
PRPF39-203ENST00000477626 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
PRPF39-203ENST00000477626 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
PRPF39-203ENST00000477626 NPM2Q86SE8 214 aaKnown RBP14.8□□□□□ -0.04
PRPF39-203ENST00000477626 TTC14Q96N46 770 aa14.8□□□□□ -0.04
PRPF39-203ENST00000477626 TRMT112Q9UI30 125 aaKnown RBP14.8□□□□□ -0.04
PRPF39-203ENST00000477626 MAP4K4O95819 1239 aaPredicted RBP14.8□□□□□ -0.04
PRPF39-203ENST00000477626 TSGA10IPQ3SY00 556 aa14.8□□□□□ -0.04
PRPF39-203ENST00000477626 CRY2Q49AN0 593 aa14.8□□□□□ -0.04
PRPF39-203ENST00000477626 CNTROBQ8N137 903 aa14.8□□□□□ -0.04
PRPF39-203ENST00000477626 EDC3Q96F86 508 aaKnown RBP14.8□□□□□ -0.04
PRPF39-203ENST00000477626 CARMIL3Q8ND23 1372 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 GYS1P13807 737 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 PTH1RQ03431 593 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 ZNF827Q17R98 1081 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 SEC31BQ9NQW1 1179 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 TIMM10P62072 90 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 ILDR1Q86SU0 546 aaPredicted RBP14.79□□□□□ -0.04
PRPF39-203ENST00000477626 MAP4K1Q92918 833 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 FAM227BQ96M60 508 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 NIP7Q9Y221 180 aaKnown RBP eCLIP14.79□□□□□ -0.046e-7■■■■■ 31.5
PRPF39-203ENST00000477626 MROH5Q6ZUA9 1318 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 GOLGB1Q14789 3259 aaKnown RBP14.79□□□□□ -0.04
PRPF39-203ENST00000477626 PDE8BO95263 885 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 IFIT2P09913 472 aaKnown RBP14.79□□□□□ -0.04
PRPF39-203ENST00000477626 SSFA2P28290 1259 aa14.79□□□□□ -0.04
PRPF39-203ENST00000477626 ZNF589Q86UQ0 364 aaPredicted RBP14.79□□□□□ -0.04
PRPF39-203ENST00000477626 HCLS1P14317 486 aaPredicted RBP14.78□□□□□ -0.04
PRPF39-203ENST00000477626 SLC4A3P48751 1232 aa14.78□□□□□ -0.04
PRPF39-203ENST00000477626 TCRBV5S4A2TA0A5A2 114 aa14.78□□□□□ -0.04
PRPF39-203ENST00000477626 IFIT5Q13325 482 aaKnown RBP14.78□□□□□ -0.04
PRPF39-203ENST00000477626 XAGE2Q96GT9 111 aa14.78□□□□□ -0.04
PRPF39-203ENST00000477626 RXRBP28702 533 aa14.77□□□□□ -0.04
PRPF39-203ENST00000477626 RASEFQ8IZ41 740 aa14.77□□□□□ -0.04
PRPF39-203ENST00000477626 GNPATO15228 680 aa14.77□□□□□ -0.05
PRPF39-203ENST00000477626 NMIQ13287 307 aaPredicted RBP14.77□□□□□ -0.05
PRPF39-203ENST00000477626 KBTBD3Q8NAB2 608 aa14.77□□□□□ -0.05
PRPF39-203ENST00000477626 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
PRPF39-203ENST00000477626 REC8O95072 547 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 MCAMP43121 646 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 CCDC57Q2TAC2 916 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 NDUFB9Q9Y6M9 179 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 ZNF652Q9Y2D9 606 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 ANKRD18BA2A2Z9 1011 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 TAF5LO75529 589 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 TAF6LQ9Y6J9 622 aa14.76□□□□□ -0.05
PRPF39-203ENST00000477626 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 NFIXQ14938 502 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 IL27Q8NEV9 243 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 CYP2E1P05181 493 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-203ENST00000477626 DDR1Q08345 913 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 BOLA2Q9H3K6 86 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 WTIPA6NIX2 430 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-203ENST00000477626 TRIM37O94972 964 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 RABEP1Q15276 862 aa14.75□□□□□ -0.05
PRPF39-203ENST00000477626 ALDH8A1Q9H2A2 487 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-203ENST00000477626 BSDC1Q9NW68 430 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-203ENST00000477626 POLRMTO00411 1230 aaKnown RBP14.74□□□□□ -0.05
PRPF39-203ENST00000477626 TXNRD1Q16881 649 aa14.74□□□□□ -0.05
PRPF39-203ENST00000477626 RTCBQ9Y3I0 505 aaKnown RBP14.74□□□□□ -0.05
PRPF39-203ENST00000477626 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
PRPF39-203ENST00000477626 PDS5AQ29RF7 1337 aaKnown RBP14.74□□□□□ -0.05
PRPF39-203ENST00000477626 CUL4AQ13619 759 aa14.74□□□□□ -0.05
PRPF39-203ENST00000477626 GPATCH3Q96I76 525 aa14.74□□□□□ -0.05
PRPF39-203ENST00000477626 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
PRPF39-203ENST00000477626 OS9Q13438 667 aaPredicted RBP14.73□□□□□ -0.05
PRPF39-203ENST00000477626 UPF2Q9HAU5 1272 aaKnown RBP14.73□□□□□ -0.05
PRPF39-203ENST00000477626 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
PRPF39-203ENST00000477626 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
PRPF39-203ENST00000477626 SLFNL1Q499Z3 407 aa14.73□□□□□ -0.05
PRPF39-203ENST00000477626 PAG1Q9NWQ8 432 aa14.73□□□□□ -0.05
PRPF39-203ENST00000477626 ST3GAL1Q11201 340 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 CLEC17AQ6ZS10 378 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 CAMKK2Q96RR4 588 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
PRPF39-203ENST00000477626 CCDC152Q4G0S7 254 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 LPIN2Q92539 896 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 SLX4Q8IY92 1834 aa14.72□□□□□ -0.05
PRPF39-203ENST00000477626 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.05
PRPF39-203ENST00000477626 ZNF384Q8TF68 577 aa14.71□□□□□ -0.05
PRPF39-203ENST00000477626 CELF1Q92879 486 aaKnown RBP14.71□□□□□ -0.05
PRPF39-203ENST00000477626 TM6SF1Q9BZW5 370 aa14.71□□□□□ -0.05
PRPF39-203ENST00000477626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.05
PRPF39-203ENST00000477626 HIP1O00291 1037 aa14.71□□□□□ -0.05
PRPF39-203ENST00000477626 PRR5LQ6MZQ0 368 aa14.71□□□□□ -0.05
PRPF39-203ENST00000477626 MAST3O60307 1309 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms