RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 SLC9C1Q4G0N8 1177 aa13.85□□□□□ -0.19
TRAIP-206ENST00000477546 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
TRAIP-206ENST00000477546 SPRYD7Q5W111 196 aa13.85□□□□□ -0.19
TRAIP-206ENST00000477546 GRAPLQ8TC17 118 aaPredicted RBP13.85□□□□□ -0.19
TRAIP-206ENST00000477546 DPF3Q92784 378 aa13.85□□□□□ -0.19
TRAIP-206ENST00000477546 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
TRAIP-206ENST00000477546 NF2P35240 595 aa13.84□□□□□ -0.19
TRAIP-206ENST00000477546 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
TRAIP-206ENST00000477546 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
TRAIP-206ENST00000477546 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
TRAIP-206ENST00000477546 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
TRAIP-206ENST00000477546 NUP98P52948 1817 aa13.83□□□□□ -0.2
TRAIP-206ENST00000477546 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
TRAIP-206ENST00000477546 PTPN12Q05209 780 aaKnown RBP13.83□□□□□ -0.2
TRAIP-206ENST00000477546 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
TRAIP-206ENST00000477546 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.2
TRAIP-206ENST00000477546 TTLL7Q6ZT98 887 aa13.83□□□□□ -0.2
TRAIP-206ENST00000477546 ANKRD13DQ6ZTN6 518 aa13.83□□□□□ -0.2
TRAIP-206ENST00000477546 DDX46Q7L014 1031 aaKnown RBP13.83□□□□□ -0.2
TRAIP-206ENST00000477546 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 SP3Q02447 781 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
TRAIP-206ENST00000477546 GPR153Q6NV75 609 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 ARMC9Q7Z3E5 817 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 AGBL3Q8NEM8 1001 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
TRAIP-206ENST00000477546 ZBTB3Q9H5J0 574 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 LAMA3Q16787 3333 aa13.82□□□□□ -0.2
TRAIP-206ENST00000477546 LRRC37AA6NMS7 1700 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 IGF2BP3O00425 579 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAIP-206ENST00000477546 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
TRAIP-206ENST00000477546 CAP1Q01518 475 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 LDLRAD1Q5T700 205 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
TRAIP-206ENST00000477546 EYA3Q99504 573 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 MYOZ2Q9NPC6 264 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 NSFL1CQ9UNZ2 370 aaKnown RBP13.81□□□□□ -0.2
TRAIP-206ENST00000477546 SCAF8Q9UPN6 1271 aaKnown RBP13.81□□□□□ -0.2
TRAIP-206ENST00000477546 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
TRAIP-206ENST00000477546 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
TRAIP-206ENST00000477546 C6orf229H3BNL8 230 aa13.8□□□□□ -0.2
TRAIP-206ENST00000477546 CRHR2Q13324 411 aa13.8□□□□□ -0.2
TRAIP-206ENST00000477546 PRDM6Q9NQX0 595 aa13.8□□□□□ -0.2
TRAIP-206ENST00000477546 POLLQ9UGP5 575 aa13.8□□□□□ -0.2
TRAIP-206ENST00000477546 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
TRAIP-206ENST00000477546 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-206ENST00000477546 ZBTB48P10074 688 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-206ENST00000477546 ARHGEF6Q15052 776 aa13.79□□□□□ -0.2
TRAIP-206ENST00000477546 RSBN1LQ6PCB5 846 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-206ENST00000477546 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAIP-206ENST00000477546 DEFB123Q8N688 67 aa13.79□□□□□ -0.2
TRAIP-206ENST00000477546 HTATIP2Q9BUP3 242 aa13.79□□□□□ -0.2
TRAIP-206ENST00000477546 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
TRAIP-206ENST00000477546 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
TRAIP-206ENST00000477546 USP17L8P0C7I0 530 aa13.78□□□□□ -0.2
TRAIP-206ENST00000477546 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
TRAIP-206ENST00000477546 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
TRAIP-206ENST00000477546 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.21
TRAIP-206ENST00000477546 ZBTB7BO15156 539 aaPredicted RBP13.77□□□□□ -0.21
TRAIP-206ENST00000477546 HCLS1P14317 486 aaPredicted RBP13.77□□□□□ -0.21
TRAIP-206ENST00000477546 ANKRD36CQ5JPF3 1778 aa13.77□□□□□ -0.21
TRAIP-206ENST00000477546 GMLQ99445 158 aa13.77□□□□□ -0.21
TRAIP-206ENST00000477546 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
TRAIP-206ENST00000477546 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
TRAIP-206ENST00000477546 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
TRAIP-206ENST00000477546 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
TRAIP-206ENST00000477546 SLC10A4Q96EP9 437 aa13.76□□□□□ -0.21
TRAIP-206ENST00000477546 MYL6BP14649 208 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 GPSM2P81274 684 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 PRKG1Q13976 671 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 SH3TC2Q8TF17 1288 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
TRAIP-206ENST00000477546 MTMR10Q9NXD2 777 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
TRAIP-206ENST00000477546 LAMB2P55268 1798 aa13.75□□□□□ -0.21
TRAIP-206ENST00000477546 G3V3G9 751 aa13.74□□□□□ -0.21
TRAIP-206ENST00000477546 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
TRAIP-206ENST00000477546 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
TRAIP-206ENST00000477546 MCM10Q7L590 875 aa13.74□□□□□ -0.21
TRAIP-206ENST00000477546 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
TRAIP-206ENST00000477546 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
TRAIP-206ENST00000477546 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
TRAIP-206ENST00000477546 Q7L0L9 218 aa13.73□□□□□ -0.21
TRAIP-206ENST00000477546 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
TRAIP-206ENST00000477546 LAMB1P07942 1786 aa13.73□□□□□ -0.21
TRAIP-206ENST00000477546 SH3TC1Q8TE82 1336 aa13.72□□□□□ -0.21
TRAIP-206ENST00000477546 WNT10BO00744 389 aa13.72□□□□□ -0.21
TRAIP-206ENST00000477546 MAP3K11Q16584 847 aa13.72□□□□□ -0.21
TRAIP-206ENST00000477546 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
TRAIP-206ENST00000477546 COL3A1P02461 1466 aaPredicted RBP13.72□□□□□ -0.21
TRAIP-206ENST00000477546 TESPA1A2RU30 521 aaPredicted RBP13.71□□□□□ -0.21
TRAIP-206ENST00000477546 UNCXA6NJT0 531 aa13.71□□□□□ -0.21
TRAIP-206ENST00000477546 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.21
TRAIP-206ENST00000477546 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
TRAIP-206ENST00000477546 APOBEC3FQ8IUX4 373 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms