RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 TAL1P17542 331 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-212ENST00000477520 IER5Q5VY09 327 aa6.41□□□□□ -1.38
PTCD3-212ENST00000477520 ELMSAN1Q6PJG2 1045 aa6.41□□□□□ -1.38
PTCD3-212ENST00000477520 USP17L2Q6R6M4 530 aa6.41□□□□□ -1.38
PTCD3-212ENST00000477520 USP17L1Q7RTZ2 530 aa6.41□□□□□ -1.38
PTCD3-212ENST00000477520 KRT25Q7Z3Z0 450 aa6.41□□□□□ -1.38
PTCD3-212ENST00000477520 AKTIPQ9H8T0 292 aa6.41□□□□□ -1.38
PTCD3-212ENST00000477520 YBX3P16989 372 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTCD3-212ENST00000477520 ATP1A2P50993 1020 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 IRAK1P51617 712 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.38
PTCD3-212ENST00000477520 SLC51AQ86UW1 340 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 PLEKHM2Q8IWE5 1019 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 STAG2Q8N3U4 1231 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 OGFOD1Q8N543 542 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 TRPM4Q8TD43 1214 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 ADAMTS19Q8TE59 1207 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 TTC9Q92623 222 aa6.4□□□□□ -1.38
PTCD3-212ENST00000477520 F8W735 103 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-212ENST00000477520 TGFBR3LH3BV60 316 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 TARSP26639 723 aaKnown RBP6.39□□□□□ -1.39
PTCD3-212ENST00000477520 PCSK7Q16549 785 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 HIF1AQ16665 826 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 HFE2Q6ZVN8 426 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 SIX5Q8N196 739 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 SCG3Q8WXD2 468 aaKnown RBP6.39□□□□□ -1.39
PTCD3-212ENST00000477520 IFT43Q96FT9 208 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 SMG9Q9H0W8 520 aaKnown RBP6.39□□□□□ -1.39
PTCD3-212ENST00000477520 NOP58Q9Y2X3 529 aaKnown RBP6.39□□□□□ -1.39
PTCD3-212ENST00000477520 NUP160Q12769 1436 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 KIAA0586Q9BVV6 1533 aa6.39□□□□□ -1.39
PTCD3-212ENST00000477520 PALM3A6NDB9 673 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-212ENST00000477520 TGFB1P01137 390 aa6.38□□□□□ -1.39
PTCD3-212ENST00000477520 INPP5BP32019 993 aa6.38□□□□□ -1.39
PTCD3-212ENST00000477520 GPLD1P80108 840 aa6.38□□□□□ -1.39
PTCD3-212ENST00000477520 GAS2L2Q8NHY3 880 aa6.38□□□□□ -1.39
PTCD3-212ENST00000477520 ZNF594Q96JF6 807 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-212ENST00000477520 UCN2Q96RP3 112 aa6.38□□□□□ -1.39
PTCD3-212ENST00000477520 TNIKQ9UKE5 1360 aa6.37□□□□□ -1.39
PTCD3-212ENST00000477520 KIAA1324LA8MWY0 1029 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-212ENST00000477520 SASH3O75995 380 aa6.37□□□□□ -1.39
PTCD3-212ENST00000477520 GP2P55259 537 aaKnown RBP6.37□□□□□ -1.39
PTCD3-212ENST00000477520 RTN1Q16799 776 aa6.37□□□□□ -1.39
PTCD3-212ENST00000477520 AGGF1Q8N302 714 aaeCLIP6.37□□□□□ -1.39
PTCD3-212ENST00000477520 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
PTCD3-212ENST00000477520 MKRN1Q9UHC7 482 aaKnown RBP6.37□□□□□ -1.39
PTCD3-212ENST00000477520 CTTNBP2Q8WZ74 1663 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 IQGAP2Q13576 1575 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 CEP170Q5SW79 1584 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 POM121CA8CG34 1229 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 LGR5O75473 907 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 IDH3AP50213 366 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 Q6ZS46 218 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 POM121Q96HA1 1249 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
PTCD3-212ENST00000477520 KLK14Q9P0G3 267 aa6.36□□□□□ -1.39
PTCD3-212ENST00000477520 UBL7Q96S82 380 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-212ENST00000477520 RAXQ9Y2V3 346 aa6.35□□□□□ -1.39
PTCD3-212ENST00000477520 RNF114Q9Y508 228 aa6.35□□□□□ -1.39
PTCD3-212ENST00000477520 CLASP1Q7Z460 1538 aa6.35□□□□□ -1.39
PTCD3-212ENST00000477520 CARMIL2Q6F5E8 1435 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 ATP9BO43861 1147 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 IGLV1-40P01703 118 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 RARAP10276 462 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 EPB42P16452 691 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 EIF2AK2P19525 551 aaKnown RBP6.34□□□□□ -1.39
PTCD3-212ENST00000477520 SETDB1Q15047 1291 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 CCDC136Q96JN2 1154 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 PPP4R2Q9NY27 417 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 TIMELESSQ9UNS1 1208 aa6.34□□□□□ -1.39
PTCD3-212ENST00000477520 WASHC2AQ641Q2 1341 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 WASHC2CQ9Y4E1 1318 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 J3QW42 95 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 GLB1P16278 677 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 RASA1P20936 1047 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 NRLP54845 237 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 FZD5Q13467 585 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 ZDHHC13Q8IUH4 622 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 IL22RA1Q8N6P7 574 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 PLD4Q96BZ4 506 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 USP20Q9Y2K6 914 aa6.33□□□□□ -1.4
PTCD3-212ENST00000477520 UGGT2Q9NYU1 1516 aa6.32□□□□□ -1.4
PTCD3-212ENST00000477520 PPM1GO15355 546 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-212ENST00000477520 SPINK2P20155 84 aa6.32□□□□□ -1.4
PTCD3-212ENST00000477520 ANP32AP39687 249 aaKnown RBP6.32□□□□□ -1.4
PTCD3-212ENST00000477520 GDF6Q6KF10 455 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-212ENST00000477520 PRG4Q92954 1404 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-212ENST00000477520 SHROOM2Q13796 1616 aa6.32□□□□□ -1.4
PTCD3-212ENST00000477520 PTCD1O75127 700 aaKnown RBP6.31□□□□□ -1.4
PTCD3-212ENST00000477520 RANGAP1P46060 587 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-212ENST00000477520 ARSDP51689 593 aa6.31□□□□□ -1.4
PTCD3-212ENST00000477520 DGKZQ13574 1117 aa6.31□□□□□ -1.4
PTCD3-212ENST00000477520 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.31□□□□□ -1.4
PTCD3-212ENST00000477520 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
PTCD3-212ENST00000477520 TLR7Q9NYK1 1049 aaKnown RBP6.31□□□□□ -1.4
PTCD3-212ENST00000477520 PODXL2Q9NZ53 605 aa6.31□□□□□ -1.4
PTCD3-212ENST00000477520 STOML1Q9UBI4 398 aa6.31□□□□□ -1.4
PTCD3-212ENST00000477520 CEP162Q5TB80 1403 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms