RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 RGMBQ6NW40 437 aa12.9□□□□□ -0.34
COL4A5-204ENST00000477429 KRT26Q7Z3Y9 468 aa12.9□□□□□ -0.34
COL4A5-204ENST00000477429 GBA2Q9HCG7 927 aaPredicted RBP12.9□□□□□ -0.34
COL4A5-204ENST00000477429 TSPYL4Q9UJ04 414 aa12.9□□□□□ -0.34
COL4A5-204ENST00000477429 SCAF8Q9UPN6 1271 aaKnown RBP12.9□□□□□ -0.34
COL4A5-204ENST00000477429 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
COL4A5-204ENST00000477429 DDX60Q8IY21 1712 aaKnown RBP12.9□□□□□ -0.34
COL4A5-204ENST00000477429 SPTBN5Q9NRC6 3674 aaKnown RBP12.89□□□□□ -0.35
COL4A5-204ENST00000477429 TRPA1O75762 1119 aa12.89□□□□□ -0.35
COL4A5-204ENST00000477429 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
COL4A5-204ENST00000477429 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
COL4A5-204ENST00000477429 DPF2Q92785 391 aa12.89□□□□□ -0.35
COL4A5-204ENST00000477429 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
COL4A5-204ENST00000477429 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
COL4A5-204ENST00000477429 SCN9AQ15858 1988 aa12.89□□□□□ -0.35
COL4A5-204ENST00000477429 H7C1D1 291 aa12.88□□□□□ -0.35
COL4A5-204ENST00000477429 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
COL4A5-204ENST00000477429 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
COL4A5-204ENST00000477429 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
COL4A5-204ENST00000477429 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
COL4A5-204ENST00000477429 CACNA1AO00555 2505 aa12.87□□□□□ -0.35
COL4A5-204ENST00000477429 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
COL4A5-204ENST00000477429 ATP5J2-PTCD1G3V325 749 aa12.87□□□□□ -0.35
COL4A5-204ENST00000477429 ECE2O60344 883 aa12.87□□□□□ -0.35
COL4A5-204ENST00000477429 ZNF157P51786 506 aaPredicted RBP12.87□□□□□ -0.35
COL4A5-204ENST00000477429 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
COL4A5-204ENST00000477429 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
COL4A5-204ENST00000477429 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
COL4A5-204ENST00000477429 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
COL4A5-204ENST00000477429 SLC10A3P09131 477 aa12.86□□□□□ -0.35
COL4A5-204ENST00000477429 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
COL4A5-204ENST00000477429 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 RIPK4P57078 832 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
COL4A5-204ENST00000477429 RASAL3Q86YV0 1011 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 CDCA5Q96FF9 252 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 SEC31BQ9NQW1 1179 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 SAGE1Q9NXZ1 904 aa12.85□□□□□ -0.35
COL4A5-204ENST00000477429 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
COL4A5-204ENST00000477429 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
COL4A5-204ENST00000477429 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
COL4A5-204ENST00000477429 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
COL4A5-204ENST00000477429 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
COL4A5-204ENST00000477429 RAPGEFL1Q9UHV5 662 aa12.84□□□□□ -0.35
COL4A5-204ENST00000477429 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
COL4A5-204ENST00000477429 HSP90AB3PQ58FF7 597 aa12.83□□□□□ -0.36
COL4A5-204ENST00000477429 ANGEL2Q5VTE6 544 aaKnown RBP12.83□□□□□ -0.36
COL4A5-204ENST00000477429 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
COL4A5-204ENST00000477429 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
COL4A5-204ENST00000477429 CHL1O00533 1208 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 SCARF1Q14162 830 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 PLBD2Q8NHP8 589 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 R3HDMLQ9H3Y0 253 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
COL4A5-204ENST00000477429 HTTP42858 3142 aa12.81□□□□□ -0.36
COL4A5-204ENST00000477429 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
COL4A5-204ENST00000477429 RPS12P25398 132 aaKnown RBP12.81□□□□□ -0.36
COL4A5-204ENST00000477429 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
COL4A5-204ENST00000477429 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
COL4A5-204ENST00000477429 GMLQ99445 158 aa12.81□□□□□ -0.36
COL4A5-204ENST00000477429 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
COL4A5-204ENST00000477429 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
COL4A5-204ENST00000477429 NEFMP07197 916 aa12.8□□□□□ -0.36
COL4A5-204ENST00000477429 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
COL4A5-204ENST00000477429 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
COL4A5-204ENST00000477429 ANKRD13DQ6ZTN6 518 aa12.8□□□□□ -0.36
COL4A5-204ENST00000477429 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
COL4A5-204ENST00000477429 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
COL4A5-204ENST00000477429 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
COL4A5-204ENST00000477429 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
COL4A5-204ENST00000477429 UFL1O94874 794 aa12.79□□□□□ -0.36
COL4A5-204ENST00000477429 COL9A1P20849 921 aa12.79□□□□□ -0.36
COL4A5-204ENST00000477429 RSBN1LQ6PCB5 846 aaPredicted RBP12.79□□□□□ -0.36
COL4A5-204ENST00000477429 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
COL4A5-204ENST00000477429 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
COL4A5-204ENST00000477429 LAMA3Q16787 3333 aa12.79□□□□□ -0.36
COL4A5-204ENST00000477429 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
COL4A5-204ENST00000477429 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
COL4A5-204ENST00000477429 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
COL4A5-204ENST00000477429 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
COL4A5-204ENST00000477429 HDGFL1Q5TGJ6 251 aa12.78□□□□□ -0.36
COL4A5-204ENST00000477429 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
COL4A5-204ENST00000477429 FZD1Q9UP38 647 aa12.78□□□□□ -0.36
COL4A5-204ENST00000477429 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
COL4A5-204ENST00000477429 CENPFP49454 3210 aa12.77□□□□□ -0.36
COL4A5-204ENST00000477429 ZNF646O15015 1829 aaPredicted RBP12.77□□□□□ -0.37
COL4A5-204ENST00000477429 EYA3Q99504 573 aa12.77□□□□□ -0.37
COL4A5-204ENST00000477429 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
COL4A5-204ENST00000477429 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.37
COL4A5-204ENST00000477429 ZNF609O15014 1411 aa12.77□□□□□ -0.37
COL4A5-204ENST00000477429 PAPPA2Q9BXP8 1791 aa12.76□□□□□ -0.37
COL4A5-204ENST00000477429 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
COL4A5-204ENST00000477429 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms