RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ZNF526Q8TF50 670 aaPredicted RBP15.54■□□□□ 0.08
CLCNKA-205ENST00000477360 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
CLCNKA-205ENST00000477360 ZC3H12CQ9C0D7 883 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-205ENST00000477360 NMRK2Q9NPI5 230 aa15.54■□□□□ 0.08
CLCNKA-205ENST00000477360 ANKIB1Q9P2G1 1089 aa15.54■□□□□ 0.08
CLCNKA-205ENST00000477360 POLLQ9UGP5 575 aa15.54■□□□□ 0.08
CLCNKA-205ENST00000477360 C6orf229H3BNL8 230 aa15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 GNAI3P08754 354 aa15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 FSTL1Q12841 308 aa15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 TNIP1Q15025 636 aa15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 AOC3Q16853 763 aa15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 ZKSCAN2Q63HK3 967 aa15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 C16orf71Q8IYS4 520 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 CCDC85AQ96PX6 553 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-205ENST00000477360 MED23Q9ULK4 1368 aa15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 TRIM27P14373 513 aa15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 EPHA10Q5JZY3 1008 aa15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 C15orf52Q6ZUT6 534 aaKnown RBP15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 SUCLG2Q96I99 432 aa15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 RRAGCQ9HB90 399 aa15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
CLCNKA-205ENST00000477360 ZNF609O15014 1411 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 COL4A1P02462 1669 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 COL4A5P29400 1685 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 ZNF541Q9H0D2 1346 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 POTECB2RU33 542 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 BCAR3O75815 825 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 DDNO94850 711 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 UFL1O94874 794 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 UBTFL1P0CB47 393 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 MS4A1P11836 297 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 PODNQ7Z5L7 613 aa15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-205ENST00000477360 TAF1P21675 1872 aa15.5■□□□□ 0.07
CLCNKA-205ENST00000477360 SCN4AP35499 1836 aa15.5■□□□□ 0.07
CLCNKA-205ENST00000477360 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
CLCNKA-205ENST00000477360 LDHAL6AQ6ZMR3 332 aa15.5■□□□□ 0.07
CLCNKA-205ENST00000477360 PNMA8AQ86V59 439 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-205ENST00000477360 ANKRD44Q8N8A2 993 aa15.5■□□□□ 0.07
CLCNKA-205ENST00000477360 RPS12P25398 132 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 MMP14P50281 582 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 CXCL9Q07325 125 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 CIAPIN1Q6FI81 312 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 SMC1BQ8NDV3 1235 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 DPF2Q92785 391 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 CHMP3Q9Y3E7 222 aa15.49■□□□□ 0.07
CLCNKA-205ENST00000477360 ZNF804BA4D1E1 1349 aa15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 MROH5Q6ZUA9 1318 aa15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 CHRNDQ07001 517 aa15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 MTX1Q13505 466 aa15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 COA1Q9GZY4 146 aa15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 TAF1DQ9H5J8 278 aaPredicted RBP15.48■□□□□ 0.07
CLCNKA-205ENST00000477360 LMOD1P29536 600 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-205ENST00000477360 RIPOR2Q9Y4F9 1068 aa15.47■□□□□ 0.07
CLCNKA-205ENST00000477360 YDJCA8MPS7 323 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 ECE2O60344 883 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 EPHX2P34913 555 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 SCNN1DP51172 638 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 UBE4AQ14139 1066 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 USP50Q70EL3 339 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 CNNM1Q9NRU3 951 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 GPRC5DQ9NZD1 345 aa15.46■□□□□ 0.07
CLCNKA-205ENST00000477360 G3V3G9 751 aa15.45■□□□□ 0.06
CLCNKA-205ENST00000477360 CIAO1O76071 339 aa15.45■□□□□ 0.06
CLCNKA-205ENST00000477360 VIL1P09327 827 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-205ENST00000477360 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
CLCNKA-205ENST00000477360 FTSJ3Q8IY81 847 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-205ENST00000477360 MEIS3Q99687 375 aa15.45■□□□□ 0.06
CLCNKA-205ENST00000477360 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 RIMBP2O15034 1052 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 ZBTB22O15209 634 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 GNAI2P04899 355 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 KCNJ4P48050 445 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 AGBL3Q8NEM8 1001 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 ZC3H15Q8WU90 426 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 ADARB2Q9NS39 739 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 GJA3Q9Y6H8 435 aa15.44■□□□□ 0.06
CLCNKA-205ENST00000477360 MYO3BQ8WXR4 1341 aa15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 HSPA6P17066 643 aa15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 PTPN12Q05209 780 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 STRIP1Q5VSL9 837 aa15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 TMEM57Q8N5G2 664 aa15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-205ENST00000477360 USP17L3A6NCW0 530 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 USP17L4A6NCW7 530 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 EYA2O00167 538 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 PSMD14O00487 310 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 RAD17O75943 681 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms