RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 ABCC2Q92887 1545 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 PLEKHD1A6NEE1 506 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 IGFBP4P22692 258 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 LMOD1P29536 600 aaPredicted RBP6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 RAC1P63000 192 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 RTN1Q16799 776 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 IER5Q5VY09 327 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 MCTP1Q6DN14 999 aa6.98□□□□□ -1.29
NSMCE4A-208ENST00000477289 ARID3CA6NKF2 412 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 HIF1AQ16665 826 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 CFAP70Q5T0N1 1121 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 GSX2Q9BZM3 304 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 VRTNQ9H8Y1 702 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 USP21Q9UK80 565 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 RAPGEF6Q8TEU7 1601 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 PLB1Q6P1J6 1458 aa6.97□□□□□ -1.29
NSMCE4A-208ENST00000477289 JPH1Q9HDC5 661 aaPredicted RBP6.96□□□□□ -1.3
NSMCE4A-208ENST00000477289 RNF112Q9ULX5 631 aa6.96□□□□□ -1.3
NSMCE4A-208ENST00000477289 HECW1Q76N89 1606 aa6.96□□□□□ -1.3
NSMCE4A-208ENST00000477289 WEE1P30291 646 aa6.95□□□□□ -1.3
NSMCE4A-208ENST00000477289 NUDT8Q8WV74 236 aa6.95□□□□□ -1.3
NSMCE4A-208ENST00000477289 UBE2OQ9C0C9 1292 aaKnown RBP6.95□□□□□ -1.3
NSMCE4A-208ENST00000477289 KLK14Q9P0G3 267 aa6.95□□□□□ -1.3
NSMCE4A-208ENST00000477289 SLC6A14Q9UN76 642 aa6.95□□□□□ -1.3
NSMCE4A-208ENST00000477289 ABCA8O94911 1581 aa6.95□□□□□ -1.3
NSMCE4A-208ENST00000477289 CASKIN1Q8WXD9 1431 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 CCDC18Q5T9S5 1454 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 INPP5BP32019 993 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 TBC1D8BQ0IIM8 1120 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 FAM69CQ0P6D2 419 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 FMR1NBQ8N0W7 255 aaPredicted RBP6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 IGFLR1Q9H665 355 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 QTRT2Q9H974 415 aaKnown RBP6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 EFCC1Q9HA90 598 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 DNAJB12Q9NXW2 375 aaKnown RBP6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 NAGPAQ9UK23 515 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 ADCY10Q96PN6 1610 aa6.94□□□□□ -1.3
NSMCE4A-208ENST00000477289 FYCO1Q9BQS8 1478 aa6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 KDM5BQ9UGL1 1544 aa6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 NFKB1P19838 968 aa6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 AFF1P51825 1210 aaKnown RBP6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 CCINQ13939 588 aa6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 ZNF777Q9ULD5 760 aaPredicted RBP6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 VPS8Q8N3P4 1428 aa6.93□□□□□ -1.3
NSMCE4A-208ENST00000477289 COL17A1Q9UMD9 1497 aaPredicted RBP6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 MAPKBP1O60336 1514 aa6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 IDH3AP50213 366 aa6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 DGKZQ13574 1117 aa6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 ILDR2Q71H61 639 aa6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 MTUS2Q5JR59 1369 aa6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 ATP10BO94823 1461 aa6.92□□□□□ -1.3
NSMCE4A-208ENST00000477289 ZCCHC11Q5TAX3 1644 aaKnown RBP6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 PAX4O43316 350 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 FOXO3O43524 673 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 CDCA8Q53HL2 280 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 PSAPL1Q6NUJ1 521 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 PNMA5Q96PV4 448 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 ZFATQ9P243 1243 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 NUP153P49790 1475 aaKnown RBP6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 WDR7Q9Y4E6 1490 aa6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 EPRSP07814 1512 aaKnown RBP6.91□□□□□ -1.3
NSMCE4A-208ENST00000477289 IREB2P48200 963 aaKnown RBP6.9□□□□□ -1.3
NSMCE4A-208ENST00000477289 MYO19Q96H55 970 aa6.9□□□□□ -1.3
NSMCE4A-208ENST00000477289 PCMTD2Q9NV79 361 aa6.9□□□□□ -1.3
NSMCE4A-208ENST00000477289 LRFN2Q9ULH4 789 aa6.9□□□□□ -1.3
NSMCE4A-208ENST00000477289 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 MICAL2O94851 1124 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 MAP3K6O95382 1288 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 EPB42P16452 691 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 ARSDP51689 593 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 FAM200AQ8TCP9 573 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 IFT43Q96FT9 208 aa6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 PCF11O94913 1555 aaKnown RBP6.89□□□□□ -1.31
NSMCE4A-208ENST00000477289 ABCC10Q5T3U5 1492 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 OPLAHO14841 1288 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 COBLO75128 1261 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 RGS9O75916 674 aaPredicted RBP6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 TARSP26639 723 aaKnown RBP6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 NOS3P29474 1203 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 TXKP42681 527 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 GRIK5Q16478 980 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 KRT25Q7Z3Z0 450 aa6.88□□□□□ -1.31
NSMCE4A-208ENST00000477289 CDK13Q14004 1512 aaKnown RBP6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 TROQ12816 1431 aaPredicted RBP6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 RFX1P22670 979 aa6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 PLAURQ03405 335 aa6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 FKBP5Q13451 457 aaPredicted RBP6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 PRR23CQ6ZRP0 262 aa6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 DHX32Q7L7V1 743 aaKnown RBP6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 FAM35AQ86V20 835 aa6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 FBXO11Q86XK2 927 aa6.87□□□□□ -1.31
NSMCE4A-208ENST00000477289 TRPM4Q8TD43 1214 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms