RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 EPHA10Q5JZY3 1008 aa16.93■□□□□ 0.3
ACTN4-205ENST00000477174 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
ACTN4-205ENST00000477174 ATP2B4P23634 1241 aa16.92■□□□□ 0.3
ACTN4-205ENST00000477174 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
ACTN4-205ENST00000477174 TAF1P21675 1872 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 BCAR3O75815 825 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 UFL1O94874 794 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 CXCL9Q07325 125 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 TNIP1Q15025 636 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 SUCLG2Q96I99 432 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 ANKRD2Q9GZV1 360 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
ACTN4-205ENST00000477174 RIMBP2O15034 1052 aa16.9■□□□□ 0.3
ACTN4-205ENST00000477174 FSTL1Q12841 308 aa16.9■□□□□ 0.3
ACTN4-205ENST00000477174 RABL6Q3YEC7 729 aaPredicted RBP16.9■□□□□ 0.3
ACTN4-205ENST00000477174 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
ACTN4-205ENST00000477174 LEMD3Q9Y2U8 911 aa16.9■□□□□ 0.3
ACTN4-205ENST00000477174 GJA3Q9Y6H8 435 aa16.9■□□□□ 0.3
ACTN4-205ENST00000477174 COL4A1P02462 1669 aa16.89■□□□□ 0.29
ACTN4-205ENST00000477174 COL4A5P29400 1685 aa16.89■□□□□ 0.29
ACTN4-205ENST00000477174 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
ACTN4-205ENST00000477174 TAF1DQ9H5J8 278 aaPredicted RBP16.89■□□□□ 0.29
ACTN4-205ENST00000477174 HACL1Q9UJ83 578 aa16.89■□□□□ 0.29
ACTN4-205ENST00000477174 LRRC37AA6NMS7 1700 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 TIAM2Q8IVF5 1701 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 CIAPIN1Q6FI81 312 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 ATF7IPQ6VMQ6 1270 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 LDHAL6AQ6ZMR3 332 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 PNMA8AQ86V59 439 aaPredicted RBP16.88■□□□□ 0.29
ACTN4-205ENST00000477174 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
ACTN4-205ENST00000477174 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
ACTN4-205ENST00000477174 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
ACTN4-205ENST00000477174 YDJCA8MPS7 323 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 G3V3G9 751 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 RAD17O75943 681 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 TRIM27P14373 513 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 DCAF8Q5TAQ9 597 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
ACTN4-205ENST00000477174 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
ACTN4-205ENST00000477174 ECE2O60344 883 aa16.86■□□□□ 0.29
ACTN4-205ENST00000477174 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
ACTN4-205ENST00000477174 LMOD1P29536 600 aaPredicted RBP16.86■□□□□ 0.29
ACTN4-205ENST00000477174 EPHX2P34913 555 aa16.86■□□□□ 0.29
ACTN4-205ENST00000477174 CHRNDQ07001 517 aa16.86■□□□□ 0.29
ACTN4-205ENST00000477174 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
ACTN4-205ENST00000477174 ANKRD44Q8N8A2 993 aa16.86■□□□□ 0.29
ACTN4-205ENST00000477174 GPR101Q96P66 508 aaPredicted RBP16.86■□□□□ 0.29
ACTN4-205ENST00000477174 HSPA6P17066 643 aa16.85■□□□□ 0.29
ACTN4-205ENST00000477174 SCNN1DP51172 638 aa16.85■□□□□ 0.29
ACTN4-205ENST00000477174 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
ACTN4-205ENST00000477174 ZNF594Q96JF6 807 aaPredicted RBP16.85■□□□□ 0.29
ACTN4-205ENST00000477174 CNNM1Q9NRU3 951 aa16.85■□□□□ 0.29
ACTN4-205ENST00000477174 MYH3P11055 1940 aa16.85■□□□□ 0.29
ACTN4-205ENST00000477174 ZNF804BA4D1E1 1349 aa16.85■□□□□ 0.29
ACTN4-205ENST00000477174 WTIPA6NIX2 430 aaPredicted RBP16.84■□□□□ 0.29
ACTN4-205ENST00000477174 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
ACTN4-205ENST00000477174 GPRC5DQ9NZD1 345 aa16.84■□□□□ 0.29
ACTN4-205ENST00000477174 PSMD14O00487 310 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 GNAI3P08754 354 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 EPS15P42566 896 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 KCNJ4P48050 445 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 GMPSP49915 693 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-205ENST00000477174 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.28
ACTN4-205ENST00000477174 DPF2Q92785 391 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 COA1Q9GZY4 146 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 RIPOR2Q9Y4F9 1068 aa16.83■□□□□ 0.28
ACTN4-205ENST00000477174 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
ACTN4-205ENST00000477174 VIL1P09327 827 aaKnown RBP16.82■□□□□ 0.28
ACTN4-205ENST00000477174 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
ACTN4-205ENST00000477174 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
ACTN4-205ENST00000477174 HELBQ8NG08 1087 aaPredicted RBP16.82■□□□□ 0.28
ACTN4-205ENST00000477174 CLUAP1Q96AJ1 413 aa16.82■□□□□ 0.28
ACTN4-205ENST00000477174 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
ACTN4-205ENST00000477174 TAF5LO75529 589 aa16.81■□□□□ 0.28
ACTN4-205ENST00000477174 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-205ENST00000477174 MEIS3Q99687 375 aa16.81■□□□□ 0.28
ACTN4-205ENST00000477174 ADARB2Q9NS39 739 aaKnown RBP16.81■□□□□ 0.28
ACTN4-205ENST00000477174 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
ACTN4-205ENST00000477174 SCN4AP35499 1836 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 H7C1D1 291 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 APLP1P51693 650 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 TXNRD3Q86VQ6 643 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
ACTN4-205ENST00000477174 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
ACTN4-205ENST00000477174 LRRFIP2Q9Y608 721 aaKnown RBP16.8■□□□□ 0.28
ACTN4-205ENST00000477174 USP17L3A6NCW0 530 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 USP17L4A6NCW7 530 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 PLIN1O60240 522 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-205ENST00000477174 UBE4AQ14139 1066 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 USP17L1Q7RTZ2 530 aa16.79■□□□□ 0.28
ACTN4-205ENST00000477174 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms