RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TOB2Q14106 344 aaPredicted RBP13.76□□□□□ -0.21
NUP188-205ENST00000477069 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
NUP188-205ENST00000477069 MYH14Q7Z406 1995 aaKnown RBP13.75□□□□□ -0.21
NUP188-205ENST00000477069 GOLIM4O00461 696 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 SYT1P21579 422 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 ZSCAN23Q3MJ62 389 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 CCDC83Q8IWF9 413 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
NUP188-205ENST00000477069 ZSCAN22P10073 491 aaPredicted RBP13.75□□□□□ -0.21
NUP188-205ENST00000477069 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 TTLL11Q8NHH1 800 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 ARXQ96QS3 562 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
NUP188-205ENST00000477069 ABCC12Q96J65 1359 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 UBN2Q6ZU65 1347 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
NUP188-205ENST00000477069 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 RIPOR2Q9Y4F9 1068 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 STX6O43752 255 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 GPTP24298 496 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 CTSWP56202 376 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 IFIT5Q13325 482 aaKnown RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 KRT32Q14532 448 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 SYTL4Q96C24 671 aaPredicted RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 CASZ1Q86V15 1759 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 KAT6BQ8WYB5 2073 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 CYP21A2P08686 494 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 GJB2P29033 226 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 ADORA1P30542 326 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 SLFNL1Q499Z3 407 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
NUP188-205ENST00000477069 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 GREM2Q9H772 168 aa13.74□□□□□ -0.21
NUP188-205ENST00000477069 ADAMTS2O95450 1211 aa13.73□□□□□ -0.21
NUP188-205ENST00000477069 EIF5P55010 431 aaKnown RBP13.73□□□□□ -0.21
NUP188-205ENST00000477069 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
NUP188-205ENST00000477069 DDB1Q16531 1140 aa13.73□□□□□ -0.21
NUP188-205ENST00000477069 VGLL2Q8N8G2 317 aa13.73□□□□□ -0.21
NUP188-205ENST00000477069 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
NUP188-205ENST00000477069 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
NUP188-205ENST00000477069 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
NUP188-205ENST00000477069 TMEM63CQ9P1W3 806 aa13.73□□□□□ -0.21
NUP188-205ENST00000477069 MAST3O60307 1309 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 MBD3O95983 291 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 NECAB1Q8N987 351 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
NUP188-205ENST00000477069 MTMR6Q9Y217 621 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 MYO5AQ9Y4I1 1855 aaKnown RBP13.72□□□□□ -0.21
NUP188-205ENST00000477069 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
NUP188-205ENST00000477069 F13A1P00488 732 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 ITGA6P23229 1130 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
NUP188-205ENST00000477069 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
NUP188-205ENST00000477069 DOCK2Q92608 1830 aa13.72□□□□□ -0.21
NUP188-205ENST00000477069 IRS4O14654 1257 aaPredicted RBP13.71□□□□□ -0.21
NUP188-205ENST00000477069 STOX1Q6ZVD7 989 aa13.71□□□□□ -0.21
NUP188-205ENST00000477069 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
NUP188-205ENST00000477069 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
NUP188-205ENST00000477069 SCARF1Q14162 830 aa13.71□□□□□ -0.21
NUP188-205ENST00000477069 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.21
NUP188-205ENST00000477069 A0A1B0GUL6 1792 aa13.71□□□□□ -0.22
NUP188-205ENST00000477069 PDE8AO60658 829 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
NUP188-205ENST00000477069 CCDC158Q5M9N0 1113 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 M0R2C6 588 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
NUP188-205ENST00000477069 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
NUP188-205ENST00000477069 TAF7LQ5H9L4 462 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 ZNF512BQ96KM6 892 aaPredicted RBP13.7□□□□□ -0.22
NUP188-205ENST00000477069 AK7Q96M32 723 aa13.7□□□□□ -0.22
NUP188-205ENST00000477069 MYH15Q9Y2K3 1946 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 FOXP2O15409 715 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
NUP188-205ENST00000477069 CRKLP46109 303 aaKnown RBP13.69□□□□□ -0.22
NUP188-205ENST00000477069 ITPK1Q13572 414 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 SIK1P57059 783 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 ATP2B3Q16720 1220 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 ATRNO75882 1429 aa13.69□□□□□ -0.22
NUP188-205ENST00000477069 SCN7AQ01118 1682 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 DTNBO60941 627 aa13.68□□□□□ -0.22
NUP188-205ENST00000477069 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms