RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 NELL2Q99435 816 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 NACA2Q9H009 215 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 ETAA1Q9NY74 926 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 TBK1Q9UHD2 729 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 BICRAQ9NZM4 1560 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 BBOX1O75936 387 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 FMNL1O95466 1100 aaPredicted RBP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CA8P35219 290 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 NSUN2Q08J23 767 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CBLBQ13191 982 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 JAKMIP3Q5VZ66 844 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 KLHL10Q6JEL2 608 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CTR9Q6PD62 1173 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CCDC73Q6ZRK6 1079 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 ARHGEF25Q86VW2 580 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 SAMD14Q8IZD0 417 aaPredicted RBP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 ATRIPQ8WXE1 791 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 DHRS1Q96LJ7 313 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 ODF2LQ9ULJ1 636 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CECR2Q9BXF3 1484 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 TSPAN7P41732 249 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 NFKBIBQ15653 356 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 TBC1D25Q3MII6 688 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 CCDC178Q5BJE1 867 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 LLGL2Q6P1M3 1020 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 TBC1D20Q96BZ9 403 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 BEGAINQ9BUH8 593 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 DHX36Q9H2U1 1008 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 IFT57Q9NWB7 429 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 DDX56Q9NY93 547 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 MAFFQ9ULX9 164 aa7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 MRPL42Q9Y6G3 142 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-205ENST00000476791 ERBB4Q15303 1308 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 PABPN1LA6NDY0 278 aaKnown RBP7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 PRC1O43663 620 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 RAPGEF3O95398 923 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 S100BP04271 92 aaPredicted RBP7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 ZNF131P52739 623 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 COBLL1Q53SF7 1204 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 NCAPG2Q86XI2 1143 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 TBC1D22AQ8WUA7 517 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 XPO4Q9C0E2 1151 aaKnown RBP7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 CASS4Q9NQ75 786 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 PRDM9Q9NQV7 894 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 CHMP5Q9NZZ3 219 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 COG6Q9Y2V7 657 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 CCDC196A0A1B0GTZ2 297 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 HOXC13P31276 330 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 USP46P62068 366 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 BRICD5Q6PL45 260 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 CCBE1Q6UXH8 406 aaPredicted RBP7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 TMEM110Q86TL2 294 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 IQCGQ9H095 443 aaKnown RBP7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 LZTS1Q9Y250 596 aa7.05□□□□□ -1.28
SPTLC3-205ENST00000476791 SPTLC2O15270 562 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 MYO1BO43795 1136 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 PIK3CAP42336 1068 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 MTHFD1LQ6UB35 978 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 MCM10Q7L590 875 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 NLRP13Q86W25 1043 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 FAM160A2Q8N612 972 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 ZFPM2Q8WW38 1151 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 GOLGA1Q92805 767 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 SNX21Q969T3 373 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 CDHR1Q96JP9 859 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 TRIM6Q9C030 488 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 TANGO6Q9C0B7 1094 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 CLIC5Q9NZA1 410 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 INTUQ9ULD6 942 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 TMEM110-MUSTN1A8MSY1 372 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 CSPG5O95196 566 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 GSCP56915 257 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 PKN1Q16512 942 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 USP33Q8TEY7 942 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 CHMP7Q8WUX9 453 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 SPIRE2Q8WWL2 714 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 GIMAP1Q8WWP7 306 aa7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 AVENQ9NQS1 362 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-205ENST00000476791 FSD2A1L4K1 749 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 GOLGA6L6A8MZA4 724 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 TRIM37O94972 964 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 ZNF24P17028 368 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 VCAM1P19320 739 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 UNC5DQ6UXZ4 953 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 OTUD6AQ7L8S5 288 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 FAM81BQ96LP2 452 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 TFIP11Q9UBB9 837 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 TMCO5BA8MYB1 307 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 C19orf81C9J6K1 198 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 hCG_1984214I3L0E3 225 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 ADD2P35612 726 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 PRPF4BQ13523 1007 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 Q3C1V9 767 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 APPL2Q8NEU8 664 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 FLCNQ8NFG4 579 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms