RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 QSER1Q2KHR3 1735 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 ADAMTS7Q9UKP4 1686 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 PNMA6EA0A0J9YXQ4 647 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 MX1P20591 662 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 PDE4DQ08499 809 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 FLIIQ13045 1269 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 UVSSAQ2YD98 709 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 LINC00116Q8NCU8 138 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 IL17REQ8NFR9 667 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 LRRCC1Q9C099 1032 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 GPBP1L1Q9HC44 474 aaPredicted RBP8.3□□□□□ -1.08
UBR4-212ENST00000475973 PALD1Q9ULE6 856 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 NSFL1CQ9UNZ2 370 aaKnown RBP8.3□□□□□ -1.08
UBR4-212ENST00000475973 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 C5P01031 1676 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
UBR4-212ENST00000475973 KDM6AO15550 1401 aaPredicted RBP8.29□□□□□ -1.08
UBR4-212ENST00000475973 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 SGSM2O43147 1006 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 GRIN3BO60391 1043 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 CCDC30Q5VVM6 783 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 NLGN2Q8NFZ4 835 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 TRIM44Q96DX7 344 aaPredicted RBP8.29□□□□□ -1.08
UBR4-212ENST00000475973 TM6SF1Q9BZW5 370 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 ATG3Q9NT62 314 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 TSPYL4Q9UJ04 414 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
UBR4-212ENST00000475973 CD2APQ9Y5K6 639 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 RAD50Q92878 1312 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
UBR4-212ENST00000475973 EVI5O60447 810 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 HSP90AA1P07900 732 aaKnown RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 ITPK1Q13572 414 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 TAF7Q15545 349 aaPredicted RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 CAVIN1Q6NZI2 390 aaKnown RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 PTCD2Q8WV60 388 aaKnown RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 DDX12PQ92771 950 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 FUCA2Q9BTY2 467 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 LSG1Q9H089 658 aaKnown RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 IL25Q9H293 177 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 ALDH8A1Q9H2A2 487 aaPredicted RBP8.28□□□□□ -1.08
UBR4-212ENST00000475973 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 UTYO14607 1347 aa8.28□□□□□ -1.08
UBR4-212ENST00000475973 GNAT3A8MTJ3 354 aa8.27□□□□□ -1.09
UBR4-212ENST00000475973 F6X3S4 739 aa8.27□□□□□ -1.09
UBR4-212ENST00000475973 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
UBR4-212ENST00000475973 NEK4P51957 841 aa8.27□□□□□ -1.09
UBR4-212ENST00000475973 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
UBR4-212ENST00000475973 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.09
UBR4-212ENST00000475973 PDCL3Q9H2J4 239 aa8.27□□□□□ -1.09
UBR4-212ENST00000475973 MRC1P22897 1456 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 IRF6O14896 467 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 SLC34A2O95436 690 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 MCCP23508 829 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 RFC4P35249 363 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 HIC1Q14526 733 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 BEND3Q5T5X7 828 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 RC3H1Q5TC82 1133 aaKnown RBP8.26□□□□□ -1.09
UBR4-212ENST00000475973 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
UBR4-212ENST00000475973 NAP1L5Q96NT1 182 aaPredicted RBP8.26□□□□□ -1.09
UBR4-212ENST00000475973 CHMP4AQ9BY43 222 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 TTC41PQ6P2S7 1318 aa8.26□□□□□ -1.09
UBR4-212ENST00000475973 WDR33Q9C0J8 1336 aaKnown RBP8.26□□□□□ -1.09
UBR4-212ENST00000475973 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
UBR4-212ENST00000475973 MMP10P09238 476 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 GTF2F1P35269 517 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBR4-212ENST00000475973 EIF4A1P60842 406 aaKnown RBP8.25□□□□□ -1.09
UBR4-212ENST00000475973 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 AMIGO3Q86WK7 504 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 NLGN1Q8N2Q7 840 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 RHPN1Q8TCX5 695 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 STK31Q9BXU1 1019 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 SLC52A2Q9HAB3 445 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 MIS18AQ9NYP9 233 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 RBM27Q9P2N5 1060 aaKnown RBP8.25□□□□□ -1.09
UBR4-212ENST00000475973 CCDC39Q9UFE4 941 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 METRNQ9UJH8 293 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 EXOC6BQ9Y2D4 811 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 SNX14Q9Y5W7 946 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 CCDC171Q6TFL3 1326 aa8.25□□□□□ -1.09
UBR4-212ENST00000475973 COL24A1Q17RW2 1714 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 LETM1O95202 739 aaPredicted RBP8.24□□□□□ -1.09
UBR4-212ENST00000475973 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBR4-212ENST00000475973 CRKLP46109 303 aaKnown RBP8.24□□□□□ -1.09
UBR4-212ENST00000475973 HSP90AA2PQ14568 343 aaPredicted RBP8.24□□□□□ -1.09
UBR4-212ENST00000475973 TSGA10IPQ3SY00 556 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 C3orf67Q6ZVT6 689 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 ANP32BQ92688 251 aaKnown RBP8.24□□□□□ -1.09
UBR4-212ENST00000475973 KIF1BPQ96EK5 621 aa8.24□□□□□ -1.09
UBR4-212ENST00000475973 MAP7D2Q96T17 732 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms