RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
CALD1-217ENST00000475772 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
CALD1-217ENST00000475772 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
CALD1-217ENST00000475772 IBTKQ9P2D0 1353 aaPredicted RBP13.78□□□□□ -0.2
CALD1-217ENST00000475772 TAF1P21675 1872 aa13.78□□□□□ -0.2
CALD1-217ENST00000475772 RASSF10A6NK89 507 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 TCERG1O14776 1098 aaKnown RBP13.77□□□□□ -0.21
CALD1-217ENST00000475772 ANXA1P04083 346 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 JDP2Q8WYK2 163 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 RPGRQ92834 1020 aaKnown RBP13.77□□□□□ -0.21
CALD1-217ENST00000475772 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
CALD1-217ENST00000475772 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 LHX6Q9UPM6 363 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
CALD1-217ENST00000475772 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
CALD1-217ENST00000475772 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
CALD1-217ENST00000475772 NEFMP07197 916 aa13.76□□□□□ -0.21
CALD1-217ENST00000475772 EIF2S2P20042 333 aaKnown RBP13.76□□□□□ -0.21
CALD1-217ENST00000475772 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
CALD1-217ENST00000475772 LAMB2P55268 1798 aa13.76□□□□□ -0.21
CALD1-217ENST00000475772 POTEMA6NI47 508 aa13.75□□□□□ -0.21
CALD1-217ENST00000475772 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
CALD1-217ENST00000475772 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
CALD1-217ENST00000475772 RIPK4P57078 832 aa13.75□□□□□ -0.21
CALD1-217ENST00000475772 POTEGQ6S5H5 508 aa13.75□□□□□ -0.21
CALD1-217ENST00000475772 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
CALD1-217ENST00000475772 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
CALD1-217ENST00000475772 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
CALD1-217ENST00000475772 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
CALD1-217ENST00000475772 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
CALD1-217ENST00000475772 PARP10Q53GL7 1025 aa13.74□□□□□ -0.21
CALD1-217ENST00000475772 CST9Q5W186 159 aa13.74□□□□□ -0.21
CALD1-217ENST00000475772 PPP1R42Q7Z4L9 355 aa13.74□□□□□ -0.21
CALD1-217ENST00000475772 NLRP3Q96P20 1036 aa13.74□□□□□ -0.21
CALD1-217ENST00000475772 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
CALD1-217ENST00000475772 ANKRD36CQ5JPF3 1778 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 ABCC4O15439 1325 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 FAM205CA6NFA0 338 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 SPDYE16A6NNV3 312 aaPredicted RBP13.73□□□□□ -0.21
CALD1-217ENST00000475772 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
CALD1-217ENST00000475772 CTCFP49711 727 aaPredicted RBP13.73□□□□□ -0.21
CALD1-217ENST00000475772 LBX1P52954 281 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 AOC3Q16853 763 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
CALD1-217ENST00000475772 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
CALD1-217ENST00000475772 RTFDC1Q9BY42 306 aaPredicted RBP13.73□□□□□ -0.21
CALD1-217ENST00000475772 HSPA8P11142 646 aaKnown RBP13.72□□□□□ -0.21
CALD1-217ENST00000475772 CXCL9Q07325 125 aa13.72□□□□□ -0.21
CALD1-217ENST00000475772 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
CALD1-217ENST00000475772 USP50Q70EL3 339 aaPredicted RBP13.72□□□□□ -0.21
CALD1-217ENST00000475772 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
CALD1-217ENST00000475772 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
CALD1-217ENST00000475772 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
CALD1-217ENST00000475772 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 TRAF5O00463 557 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 PPIP5K2O43314 1243 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
CALD1-217ENST00000475772 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
CALD1-217ENST00000475772 TCIRG1Q13488 830 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 XAGE3Q8WTP9 111 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 NECTIN2Q92692 538 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 HS3ST6Q96QI5 342 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 VPS33BQ9H267 617 aa13.71□□□□□ -0.21
CALD1-217ENST00000475772 CHL1O00533 1208 aa13.7□□□□□ -0.22
CALD1-217ENST00000475772 AIMP1Q12904 312 aaKnown RBP13.7□□□□□ -0.22
CALD1-217ENST00000475772 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
CALD1-217ENST00000475772 SP8Q8IXZ3 490 aa13.7□□□□□ -0.22
CALD1-217ENST00000475772 NIM1KQ8IY84 436 aa13.7□□□□□ -0.22
CALD1-217ENST00000475772 AIDAQ96BJ3 306 aa13.7□□□□□ -0.22
CALD1-217ENST00000475772 GPRC5DQ9NZD1 345 aa13.7□□□□□ -0.22
CALD1-217ENST00000475772 ABT1Q9ULW3 272 aaKnown RBP13.7□□□□□ -0.22
CALD1-217ENST00000475772 BBOX1O75936 387 aa13.69□□□□□ -0.22
CALD1-217ENST00000475772 HIRAP54198 1017 aaPredicted RBP13.69□□□□□ -0.22
CALD1-217ENST00000475772 CYP4F22Q6NT55 531 aa13.69□□□□□ -0.22
CALD1-217ENST00000475772 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
CALD1-217ENST00000475772 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
CALD1-217ENST00000475772 ZNRF3Q9ULT6 936 aa13.69□□□□□ -0.22
CALD1-217ENST00000475772 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
CALD1-217ENST00000475772 YDJCA8MPS7 323 aa13.68□□□□□ -0.22
CALD1-217ENST00000475772 GMPSP49915 693 aaPredicted RBP13.68□□□□□ -0.22
CALD1-217ENST00000475772 MAP2K1Q02750 393 aaPredicted RBP13.68□□□□□ -0.22
CALD1-217ENST00000475772 KIAA2012Q0VF49 1180 aa13.68□□□□□ -0.22
CALD1-217ENST00000475772 MPNDQ8N594 471 aa13.68□□□□□ -0.22
CALD1-217ENST00000475772 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
CALD1-217ENST00000475772 ADARB2Q9NS39 739 aaKnown RBP13.68□□□□□ -0.22
CALD1-217ENST00000475772 TLL2Q9Y6L7 1015 aa13.68□□□□□ -0.22
CALD1-217ENST00000475772 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
CALD1-217ENST00000475772 COL4A1P02462 1669 aa13.67□□□□□ -0.22
CALD1-217ENST00000475772 DPP8Q6V1X1 898 aaPredicted RBP13.67□□□□□ -0.22
CALD1-217ENST00000475772 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
CALD1-217ENST00000475772 TRMT112Q9UI30 125 aaKnown RBP13.67□□□□□ -0.22
CALD1-217ENST00000475772 THSD7BQ9C0I4 1608 aa13.67□□□□□ -0.22
CALD1-217ENST00000475772 CASP8AP2Q9UKL3 1982 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 RAD17O75943 681 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 GRAPQ13588 217 aa13.66□□□□□ -0.22
CALD1-217ENST00000475772 RALBP1Q15311 655 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms