RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
TOP2B-206ENST00000475717 MARK1Q9P0L2 795 aa8.41□□□□□ -1.06
TOP2B-206ENST00000475717 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
TOP2B-206ENST00000475717 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
TOP2B-206ENST00000475717 PCBP4P57723 403 aaKnown RBP8.4□□□□□ -1.06
TOP2B-206ENST00000475717 LDLRAD1Q5T700 205 aa8.4□□□□□ -1.06
TOP2B-206ENST00000475717 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
TOP2B-206ENST00000475717 EFSO43281 561 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 EPXP11678 715 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 ADH6P28332 368 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 GRNP28799 593 aaKnown RBP8.39□□□□□ -1.07
TOP2B-206ENST00000475717 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
TOP2B-206ENST00000475717 FAM182BQ5T319 152 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 GPAT2Q6NUI2 795 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 TMEM87AQ8NBN3 555 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
TOP2B-206ENST00000475717 GRIN2CQ14957 1233 aa8.38□□□□□ -1.07
TOP2B-206ENST00000475717 BRD7Q9NPI1 651 aa8.38□□□□□ -1.07
TOP2B-206ENST00000475717 MKL2Q9ULH7 1088 aa8.38□□□□□ -1.07
TOP2B-206ENST00000475717 PHACTR2O75167 634 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 XYLBO75191 536 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 ZC3H6P61129 1189 aaKnown RBP8.37□□□□□ -1.07
TOP2B-206ENST00000475717 SFSWAPQ12872 951 aaKnown RBP8.37□□□□□ -1.07
TOP2B-206ENST00000475717 LAMC2Q13753 1193 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 USPL1Q5W0Q7 1092 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 ZFYVE28Q9HCC9 887 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 TMEM63CQ9P1W3 806 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 AK5Q9Y6K8 562 aa8.37□□□□□ -1.07
TOP2B-206ENST00000475717 EGFRP00533 1210 aa8.36□□□□□ -1.07
TOP2B-206ENST00000475717 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
TOP2B-206ENST00000475717 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
TOP2B-206ENST00000475717 ZNF468Q5VIY5 522 aaPredicted RBP8.36□□□□□ -1.07
TOP2B-206ENST00000475717 FCHSD1Q86WN1 690 aa8.36□□□□□ -1.07
TOP2B-206ENST00000475717 CRELD1Q96HD1 420 aa8.36□□□□□ -1.07
TOP2B-206ENST00000475717 DCAF5Q96JK2 942 aa8.36□□□□□ -1.07
TOP2B-206ENST00000475717 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
TOP2B-206ENST00000475717 C11orf16Q9NQ32 467 aa8.36□□□□□ -1.07
TOP2B-206ENST00000475717 METTL5Q9NRN9 209 aaKnown RBP8.36□□□□□ -1.07
TOP2B-206ENST00000475717 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
TOP2B-206ENST00000475717 USP35Q9P2H5 1018 aa8.35□□□□□ -1.07
TOP2B-206ENST00000475717 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
TOP2B-206ENST00000475717 FANCCQ00597 558 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 PI16Q6UXB8 463 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 CHSY3Q70JA7 882 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 RAB44Q7Z6P3 723 aaPredicted RBP8.34□□□□□ -1.07
TOP2B-206ENST00000475717 SYT9Q86SS6 491 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 NLRP13Q86W25 1043 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 EPS8L3Q8TE67 593 aaKnown RBP8.34□□□□□ -1.07
TOP2B-206ENST00000475717 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
TOP2B-206ENST00000475717 ABI2Q9NYB9 513 aaPredicted RBP8.34□□□□□ -1.07
TOP2B-206ENST00000475717 GIPC1O14908 333 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 CTSHP09668 335 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 ZNF76P36508 570 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 KCNQ4P56696 695 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 METTL16Q86W50 562 aaKnown RBP8.33□□□□□ -1.08
TOP2B-206ENST00000475717 RNF34Q969K3 372 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 SLC30A3Q99726 388 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 NPHS2Q9NP85 383 aa8.33□□□□□ -1.08
TOP2B-206ENST00000475717 HOXB4P17483 251 aaPredicted RBP8.32□□□□□ -1.08
TOP2B-206ENST00000475717 SPEM2Q0P670 501 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 NT5DC4Q86YG4 428 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 GALNT12Q8IXK2 581 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 C1orf127Q8N9H9 656 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 SUV39H2Q9H5I1 410 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
TOP2B-206ENST00000475717 EREGO14944 169 aa8.31□□□□□ -1.08
TOP2B-206ENST00000475717 DGKGP49619 791 aa8.31□□□□□ -1.08
TOP2B-206ENST00000475717 RAD51AP2Q09MP3 1159 aa8.31□□□□□ -1.08
TOP2B-206ENST00000475717 TTC39BQ5VTQ0 682 aaPredicted RBP8.31□□□□□ -1.08
TOP2B-206ENST00000475717 PMEPA1Q969W9 287 aa8.31□□□□□ -1.08
TOP2B-206ENST00000475717 SRCIN1Q9C0H9 1055 aa8.31□□□□□ -1.08
TOP2B-206ENST00000475717 CNTN3Q9P232 1028 aa8.31□□□□□ -1.08
TOP2B-206ENST00000475717 GNB5O14775 395 aa8.3□□□□□ -1.08
TOP2B-206ENST00000475717 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
TOP2B-206ENST00000475717 COL8A1P27658 744 aa8.3□□□□□ -1.08
TOP2B-206ENST00000475717 NAALADL2Q58DX5 795 aa8.3□□□□□ -1.08
TOP2B-206ENST00000475717 LINC00114Q6XXX2 140 aa8.3□□□□□ -1.08
TOP2B-206ENST00000475717 FAM8A1Q9UBU6 413 aa8.3□□□□□ -1.08
TOP2B-206ENST00000475717 ELOA3CA0A087WX78 387 aaPredicted RBP8.29□□□□□ -1.08
TOP2B-206ENST00000475717 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
TOP2B-206ENST00000475717 PIK3R2O00459 728 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 SASH3O75995 380 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 IGHA1P01876 353 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 CES1P23141 567 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 TBC1D8BQ0IIM8 1120 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 NEUROD1Q13562 356 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 CCINQ13939 588 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
TOP2B-206ENST00000475717 SREK1Q8WXA9 508 aaKnown RBP8.29□□□□□ -1.08
TOP2B-206ENST00000475717 GADD45BO75293 160 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms