RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 STK3Q13188 491 aa13.21□□□□□ -0.3
U2AF1-209ENST00000475639 FKBP15Q5T1M5 1219 aa13.21□□□□□ -0.3
U2AF1-209ENST00000475639 UBAC1Q9BSL1 405 aa13.21□□□□□ -0.3
U2AF1-209ENST00000475639 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 CHMLP26374 656 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 DAAM2Q86T65 1068 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 IL25Q9H293 177 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 CDC25BP30305 580 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
U2AF1-209ENST00000475639 WASF1Q92558 559 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
U2AF1-209ENST00000475639 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 PLCH2O75038 1416 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 TTC6Q86TZ1 520 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
U2AF1-209ENST00000475639 HLTFQ14527 1009 aaKnown RBP eCLIP13.19□□□□□ -0.3
U2AF1-209ENST00000475639 KRT32Q14532 448 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 GNAI2P04899 355 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 ZNF165P49910 485 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 MNAT1P51948 309 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 GPATCH11Q8N954 259 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 CTNNBL1Q8WYA6 563 aaPredicted RBP13.19□□□□□ -0.3
U2AF1-209ENST00000475639 RRP15Q9Y3B9 282 aaKnown RBP13.19□□□□□ -0.3
U2AF1-209ENST00000475639 ARHGAP5Q13017 1502 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 LRRC7Q96NW7 1537 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 CTNNA2P26232 953 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 TTC39AQ5SRH9 613 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 SSH2Q76I76 1423 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 HMOX1P09601 288 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 REXO1L1PQ8IX06 675 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 DNAJC25Q9H1X3 360 aa13.19□□□□□ -0.3
U2AF1-209ENST00000475639 GGNBP2Q9H3C7 697 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 NEMFO60524 1076 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 AK2P54819 239 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 TTC14Q96N46 770 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 SEC31AO94979 1220 aaKnown RBP13.18□□□□□ -0.3
U2AF1-209ENST00000475639 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 JRKLQ9Y4A0 524 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 PABPN1LA6NDY0 278 aaKnown RBP13.18□□□□□ -0.3
U2AF1-209ENST00000475639 SASH3O75995 380 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 OAS2P29728 719 aaKnown RBP13.18□□□□□ -0.3
U2AF1-209ENST00000475639 HSPA4P34932 840 aa13.18□□□□□ -0.3
U2AF1-209ENST00000475639 UGGT1Q9NYU2 1555 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 CLGNO14967 610 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 LARGE1O95461 756 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
U2AF1-209ENST00000475639 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 GOPCQ9HD26 462 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 ELP1O95163 1332 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
U2AF1-209ENST00000475639 MEIS3Q99687 375 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 KCND1Q9NSA2 647 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 MSH6P52701 1360 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 KIF6Q6ZMV9 814 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 GOLGA5Q8TBA6 731 aa13.17□□□□□ -0.3
U2AF1-209ENST00000475639 GJB2P29033 226 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 ACTN2P35609 894 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 CCDC178Q5BJE1 867 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
U2AF1-209ENST00000475639 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.16□□□□□ -0.3
U2AF1-209ENST00000475639 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
U2AF1-209ENST00000475639 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 ANO10Q9NW15 660 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
U2AF1-209ENST00000475639 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
U2AF1-209ENST00000475639 TNIP1Q15025 636 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 CCDC6Q16204 474 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
U2AF1-209ENST00000475639 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 CETN1Q12798 172 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 SEPT6Q14141 434 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 FERMT1Q9BQL6 677 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 FANCAO15360 1455 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 SARM1Q6SZW1 724 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.3
U2AF1-209ENST00000475639 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 TSNARE1Q96NA8 513 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 FCHSD2O94868 740 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 TDRD12Q587J7 1177 aaKnown RBP13.15□□□□□ -0.3
U2AF1-209ENST00000475639 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 PPP1R14CQ8TAE6 165 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms