RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 EHD4Q9H223 541 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 ADAMTS1Q9UHI8 967 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
SDHB-205ENST00000475506 ACPPP15309 386 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 FCGRTP55899 365 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 CCDC144BQ3MJ40 725 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
SDHB-205ENST00000475506 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
SDHB-205ENST00000475506 PGBD3Q8N328 593 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 GPRASP2Q96D09 838 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 TCF12Q99081 682 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 NOC4LQ9BVI4 516 aaKnown RBP8.35□□□□□ -1.07
SDHB-205ENST00000475506 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 ABCB6Q9NP58 842 aa8.35□□□□□ -1.07
SDHB-205ENST00000475506 FAM187AA6NFU0 413 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 FAM157BP0CG42 384 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 EDN3P14138 238 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 CCINQ13939 588 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 RSRP1Q9BUV0 290 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 PIF1Q9H611 641 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 PDZRN3Q9UPQ7 1066 aa8.34□□□□□ -1.07
SDHB-205ENST00000475506 DCDC2BA2VCK2 349 aa8.33□□□□□ -1.08
SDHB-205ENST00000475506 ATXN7O15265 892 aaPredicted RBP8.33□□□□□ -1.08
SDHB-205ENST00000475506 FBXO24O75426 580 aa8.33□□□□□ -1.08
SDHB-205ENST00000475506 PMFBP1Q8TBY8 1022 aa8.33□□□□□ -1.08
SDHB-205ENST00000475506 RASGRP4Q8TDF6 673 aa8.33□□□□□ -1.08
SDHB-205ENST00000475506 OXCT2Q9BYC2 517 aaPredicted RBP8.33□□□□□ -1.08
SDHB-205ENST00000475506 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
SDHB-205ENST00000475506 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 TRPA1O75762 1119 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 RARAP10276 462 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 TNP2Q05952 138 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
SDHB-205ENST00000475506 EFHC2Q5JST6 749 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 VPS37DQ86XT2 251 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.087e-7■□□□□ 8.1
SDHB-205ENST00000475506 ZKSCAN3Q9BRR0 538 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 SPON2Q9BUD6 331 aa8.32□□□□□ -1.08
SDHB-205ENST00000475506 KHNYNO15037 678 aaKnown RBP8.31□□□□□ -1.08
SDHB-205ENST00000475506 HSP90B1P14625 803 aaKnown RBP8.31□□□□□ -1.08
SDHB-205ENST00000475506 NOP9Q86U38 636 aaKnown RBP8.31□□□□□ -1.08
SDHB-205ENST00000475506 CCNJLQ8IV13 435 aa8.31□□□□□ -1.08
SDHB-205ENST00000475506 ANKRD24Q8TF21 1146 aa8.31□□□□□ -1.08
SDHB-205ENST00000475506 HHIPQ96QV1 700 aa8.31□□□□□ -1.08
SDHB-205ENST00000475506 LIN7BQ9HAP6 207 aa8.31□□□□□ -1.08
SDHB-205ENST00000475506 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
SDHB-205ENST00000475506 SOBPA7XYQ1 873 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 KIF4AO95239 1232 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
SDHB-205ENST00000475506 NFKB1P19838 968 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
SDHB-205ENST00000475506 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
SDHB-205ENST00000475506 KIAA0825Q8IV33 1275 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 EAF1Q96JC9 268 aaPredicted RBP8.3□□□□□ -1.08
SDHB-205ENST00000475506 TMEM74Q96NL1 305 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 NDFIP2Q9NV92 336 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 PPP4R2Q9NY27 417 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
SDHB-205ENST00000475506 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 AKAP2Q9Y2D5 859 aa8.3□□□□□ -1.08
SDHB-205ENST00000475506 BNIP3LO60238 219 aa8.29□□□□□ -1.08
SDHB-205ENST00000475506 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
SDHB-205ENST00000475506 GRIA4P48058 902 aa8.29□□□□□ -1.08
SDHB-205ENST00000475506 LBRQ14739 615 aaKnown RBP8.29□□□□□ -1.08
SDHB-205ENST00000475506 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
SDHB-205ENST00000475506 RIPOR1Q6ZS17 1223 aa8.29□□□□□ -1.08
SDHB-205ENST00000475506 CEP120Q8N960 986 aa8.29□□□□□ -1.08
SDHB-205ENST00000475506 OSMRQ99650 979 aa8.29□□□□□ -1.08
SDHB-205ENST00000475506 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 CELA3AP09093 270 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 GARTP22102 1010 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 EIF4A3P38919 411 aaKnown RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 DBN1Q16643 649 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 FIGNL1Q6PIW4 674 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 DTHD1Q6ZMT9 781 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 RAB44Q7Z6P3 723 aaPredicted RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 RHOVQ96L33 236 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 HIRIP3Q9BW71 556 aaPredicted RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 TLR6Q9Y2C9 796 aa8.28□□□□□ -1.08
SDHB-205ENST00000475506 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.28□□□□□ -1.08
SDHB-205ENST00000475506 NFKBIEO00221 500 aa8.27□□□□□ -1.09
SDHB-205ENST00000475506 MAP3K6O95382 1288 aa8.27□□□□□ -1.09
SDHB-205ENST00000475506 XRCC5P13010 732 aaKnown RBP8.27□□□□□ -1.09
SDHB-205ENST00000475506 HOXD8P13378 290 aaPredicted RBP8.27□□□□□ -1.09
SDHB-205ENST00000475506 SOX18P35713 384 aa8.27□□□□□ -1.09
SDHB-205ENST00000475506 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
SDHB-205ENST00000475506 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms