RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 AK7Q96M32 723 aa18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 FAM177BA6PVY3 158 aa18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 ADORA1P30542 326 aa18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 PARP10Q53GL7 1025 aa18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 TICAM2Q86XR7 235 aa18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
RPUSD3-215ENST00000475470 BAG4O95429 457 aaKnown RBP18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 CHGBP05060 677 aa18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 PSMA5P28066 241 aa18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 SEC62Q99442 399 aaKnown RBP18.42■□□□□ 0.54
RPUSD3-215ENST00000475470 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 CCDC129Q6ZRS4 1044 aa18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 NIP7Q9Y221 180 aaKnown RBP eCLIP18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 RIC1Q4ADV7 1423 aa18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 HCLS1P14317 486 aaPredicted RBP18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 HELLSQ9NRZ9 838 aa18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
RPUSD3-215ENST00000475470 LARP6Q9BRS8 491 aaKnown RBP18.4■□□□□ 0.54
RPUSD3-215ENST00000475470 USPL1Q5W0Q7 1092 aa18.4■□□□□ 0.54
RPUSD3-215ENST00000475470 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
RPUSD3-215ENST00000475470 ZDHHC9Q9Y397 364 aa18.4■□□□□ 0.54
RPUSD3-215ENST00000475470 SPEF2Q9C093 1822 aa18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 MEX3CQ5U5Q3 659 aaKnown RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 RNF113AO15541 343 aaKnown RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 SKOR2Q2VWA4 1001 aaPredicted RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
RPUSD3-215ENST00000475470 PDE8BO95263 885 aa18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 LRRFIP1Q32MZ4 808 aaKnown RBP18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 TSGA10IPQ3SY00 556 aa18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 BLOC1S2Q6QNY1 142 aa18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 KCNQ4P56696 695 aa18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
RPUSD3-215ENST00000475470 KRT32Q14532 448 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 SLFNL1Q499Z3 407 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 NTSR2O95665 410 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 CLEC4GQ6UXB4 293 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
RPUSD3-215ENST00000475470 ABCC12Q96J65 1359 aa18.36■□□□□ 0.53
RPUSD3-215ENST00000475470 MROH5Q6ZUA9 1318 aa18.36■□□□□ 0.53
RPUSD3-215ENST00000475470 SCARF1Q14162 830 aa18.36■□□□□ 0.53
RPUSD3-215ENST00000475470 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
RPUSD3-215ENST00000475470 TAF6LQ9Y6J9 622 aa18.36■□□□□ 0.53
RPUSD3-215ENST00000475470 BRD1O95696 1058 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 CCDC152Q4G0S7 254 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 MPHOSPH8Q99549 860 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 ZAP70P43403 619 aa18.35■□□□□ 0.53
RPUSD3-215ENST00000475470 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 ANKRD1Q15327 319 aa18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 MAST3O60307 1309 aa18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 LARGE1O95461 756 aa18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 PUM3Q15397 648 aaKnown RBP18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 SEC31BQ9NQW1 1179 aa18.34■□□□□ 0.53
RPUSD3-215ENST00000475470 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.53
RPUSD3-215ENST00000475470 HELBQ8NG08 1087 aaPredicted RBP18.33■□□□□ 0.53
RPUSD3-215ENST00000475470 ZNF512BQ96KM6 892 aaPredicted RBP18.33■□□□□ 0.53
RPUSD3-215ENST00000475470 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.53
RPUSD3-215ENST00000475470 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.53
RPUSD3-215ENST00000475470 CYP21A2P08686 494 aa18.33■□□□□ 0.52
RPUSD3-215ENST00000475470 WASHC4Q2M389 1173 aa18.33■□□□□ 0.52
RPUSD3-215ENST00000475470 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.52
RPUSD3-215ENST00000475470 LPIN2Q92539 896 aa18.33■□□□□ 0.52
RPUSD3-215ENST00000475470 NEK1Q96PY6 1258 aa18.33■□□□□ 0.52
RPUSD3-215ENST00000475470 BCORQ6W2J9 1755 aa18.33■□□□□ 0.52
RPUSD3-215ENST00000475470 IGHMBP2P38935 993 aaKnown RBP18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 MCAMP43121 646 aa18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 PI16Q6UXB8 463 aa18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 TCEANC2Q96MN5 208 aa18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 LRP5O75197 1615 aa18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 HSPD1P10809 573 aaKnown RBP18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 COL9A3Q14050 684 aaPredicted RBP18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 ME3Q16798 604 aa18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
RPUSD3-215ENST00000475470 BTAF1O14981 1849 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 M0R2C6 588 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 RC3H1Q5TC82 1133 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms