RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 MROH5Q6ZUA9 1318 aa22.03■■□□□ 1.12
HIF3A-207ENST00000475432 TUBGCP6Q96RT7 1819 aa22.03■■□□□ 1.12
HIF3A-207ENST00000475432 ATP5JP18859 108 aa22.02■■□□□ 1.12
HIF3A-207ENST00000475432 DDR1Q08345 913 aa22.02■■□□□ 1.12
HIF3A-207ENST00000475432 NLGN1Q8N2Q7 840 aa22.02■■□□□ 1.12
HIF3A-207ENST00000475432 POLRMTO00411 1230 aaKnown RBP22.02■■□□□ 1.12
HIF3A-207ENST00000475432 PDE8BO95263 885 aa22.02■■□□□ 1.12
HIF3A-207ENST00000475432 BOLA2Q9H3K6 86 aa22.02■■□□□ 1.12
HIF3A-207ENST00000475432 SLC15A2Q16348 729 aa22.01■■□□□ 1.11
HIF3A-207ENST00000475432 DEFB132Q7Z7B7 95 aa22.01■■□□□ 1.11
HIF3A-207ENST00000475432 ANP32AP39687 249 aaKnown RBP22.01■■□□□ 1.11
HIF3A-207ENST00000475432 ATP2B3Q16720 1220 aa22.01■■□□□ 1.11
HIF3A-207ENST00000475432 ANKRD18AQ8IVF6 992 aa22.01■■□□□ 1.11
HIF3A-207ENST00000475432 CHMLP26374 656 aa22■■□□□ 1.11
HIF3A-207ENST00000475432 COL4A1P02462 1669 aa21.99■■□□□ 1.11
HIF3A-207ENST00000475432 EVI5LQ96CN4 794 aa21.99■■□□□ 1.11
HIF3A-207ENST00000475432 XAGE2Q96GT9 111 aa21.99■■□□□ 1.11
HIF3A-207ENST00000475432 TBC1D32Q96NH3 1257 aa21.99■■□□□ 1.11
HIF3A-207ENST00000475432 STK32BQ9NY57 414 aa21.99■■□□□ 1.11
HIF3A-207ENST00000475432 ST5P78524 1137 aa21.99■■□□□ 1.11
HIF3A-207ENST00000475432 HELBQ8NG08 1087 aaPredicted RBP21.99■■□□□ 1.11
HIF3A-207ENST00000475432 CELF1Q92879 486 aaKnown RBP21.99■■□□□ 1.11
HIF3A-207ENST00000475432 EIF5BO60841 1220 aaKnown RBP21.98■■□□□ 1.11
HIF3A-207ENST00000475432 ADORA1P30542 326 aa21.98■■□□□ 1.11
HIF3A-207ENST00000475432 BSDC1Q9NW68 430 aaPredicted RBP21.98■■□□□ 1.11
HIF3A-207ENST00000475432 PUM3Q15397 648 aaKnown RBP21.97■■□□□ 1.11
HIF3A-207ENST00000475432 GORABQ5T7V8 394 aa21.97■■□□□ 1.11
HIF3A-207ENST00000475432 C22orf23Q9BZE7 217 aa21.97■■□□□ 1.11
HIF3A-207ENST00000475432 TNRC6CQ9HCJ0 1690 aaKnown RBP21.97■■□□□ 1.11
HIF3A-207ENST00000475432 FGFR2P21802 821 aa21.96■■□□□ 1.11
HIF3A-207ENST00000475432 RPS8P62241 208 aaKnown RBP21.96■■□□□ 1.11
HIF3A-207ENST00000475432 CHRNDQ07001 517 aa21.96■■□□□ 1.11
HIF3A-207ENST00000475432 DDX46Q7L014 1031 aaKnown RBP21.96■■□□□ 1.11
HIF3A-207ENST00000475432 HAUS7Q99871 368 aa21.96■■□□□ 1.11
HIF3A-207ENST00000475432 TAF5LO75529 589 aa21.96■■□□□ 1.11
HIF3A-207ENST00000475432 CCDC158Q5M9N0 1113 aa21.96■■□□□ 1.11
HIF3A-207ENST00000475432 LPIN2Q92539 896 aa21.96■■□□□ 1.11
HIF3A-207ENST00000475432 ESYT1Q9BSJ8 1104 aa21.95■■□□□ 1.1
HIF3A-207ENST00000475432 CRY2Q49AN0 593 aa21.94■■□□□ 1.1
HIF3A-207ENST00000475432 DNAJC2Q99543 621 aaKnown RBP21.94■■□□□ 1.1
HIF3A-207ENST00000475432 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
HIF3A-207ENST00000475432 MMP10P09238 476 aa21.94■■□□□ 1.1
HIF3A-207ENST00000475432 MSL1Q68DK7 614 aa21.94■■□□□ 1.1
HIF3A-207ENST00000475432 CCDC125Q86Z20 511 aa21.94■■□□□ 1.1
HIF3A-207ENST00000475432 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.94■■□□□ 1.1
HIF3A-207ENST00000475432 EDC3Q96F86 508 aaKnown RBP21.94■■□□□ 1.1
HIF3A-207ENST00000475432 CASZ1Q86V15 1759 aa21.93■■□□□ 1.1
HIF3A-207ENST00000475432 TTC39AQ5SRH9 613 aa21.93■■□□□ 1.1
HIF3A-207ENST00000475432 MINPP1Q9UNW1 487 aa21.93■■□□□ 1.1
HIF3A-207ENST00000475432 SNAP23O00161 211 aa21.92■■□□□ 1.1
HIF3A-207ENST00000475432 REC8O95072 547 aa21.92■■□□□ 1.1
HIF3A-207ENST00000475432 IFIT1P09914 478 aaKnown RBP21.92■■□□□ 1.1
HIF3A-207ENST00000475432 SLC5A1P13866 664 aa21.92■■□□□ 1.1
HIF3A-207ENST00000475432 FSD1Q9BTV5 496 aa21.92■■□□□ 1.1
HIF3A-207ENST00000475432 RBM25P49756 843 aaKnown RBP21.91■■□□□ 1.1
HIF3A-207ENST00000475432 RPGRQ92834 1020 aaKnown RBP21.91■■□□□ 1.1
HIF3A-207ENST00000475432 DIAPH3Q9NSV4 1193 aa21.91■■□□□ 1.1
HIF3A-207ENST00000475432 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
HIF3A-207ENST00000475432 KLRG2A4D1S0 409 aaPredicted RBP21.9■■□□□ 1.1
HIF3A-207ENST00000475432 GRAPQ13588 217 aa21.9■■□□□ 1.1
HIF3A-207ENST00000475432 GRAPLQ8TC17 118 aaPredicted RBP21.9■■□□□ 1.1
HIF3A-207ENST00000475432 USP26Q9BXU7 913 aa21.9■■□□□ 1.1
HIF3A-207ENST00000475432 IL25Q9H293 177 aa21.9■■□□□ 1.1
HIF3A-207ENST00000475432 SPEF2Q9C093 1822 aa21.9■■□□□ 1.1
HIF3A-207ENST00000475432 PAG1Q9NWQ8 432 aa21.9■■□□□ 1.1
HIF3A-207ENST00000475432 CCDC102BQ68D86 513 aa21.89■■□□□ 1.1
HIF3A-207ENST00000475432 CWC27Q6UX04 472 aaKnown RBP21.89■■□□□ 1.1
HIF3A-207ENST00000475432 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.1
HIF3A-207ENST00000475432 BRIP1Q9BX63 1249 aa21.89■■□□□ 1.1
HIF3A-207ENST00000475432 TAF1P21675 1872 aa21.89■■□□□ 1.09
HIF3A-207ENST00000475432 HIP1O00291 1037 aa21.89■■□□□ 1.09
HIF3A-207ENST00000475432 GOLIM4O00461 696 aa21.89■■□□□ 1.09
HIF3A-207ENST00000475432 SGSM2O43147 1006 aa21.89■■□□□ 1.09
HIF3A-207ENST00000475432 SCARF1Q14162 830 aa21.88■■□□□ 1.09
HIF3A-207ENST00000475432 PHKA1P46020 1223 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 KBTBD3Q8NAB2 608 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 RBM17Q96I25 401 aaKnown RBP21.87■■□□□ 1.09
HIF3A-207ENST00000475432 AK9Q5TCS8 1911 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 NRXN2Q9P2S2 1712 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
HIF3A-207ENST00000475432 FKBP4Q02790 459 aaKnown RBP eCLIP21.87■■□□□ 1.09
HIF3A-207ENST00000475432 UBE4AQ14139 1066 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 RUFY2Q8WXA3 655 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 IPO9Q96P70 1041 aaKnown RBP21.87■■□□□ 1.09
HIF3A-207ENST00000475432 ANKRD2Q9GZV1 360 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 SNRKQ9NRH2 765 aa21.87■■□□□ 1.09
HIF3A-207ENST00000475432 ARID4AP29374 1257 aaPredicted RBP21.86■■□□□ 1.09
HIF3A-207ENST00000475432 MCAMP43121 646 aa21.86■■□□□ 1.09
HIF3A-207ENST00000475432 ANO2Q9NQ90 1003 aa21.86■■□□□ 1.09
HIF3A-207ENST00000475432 RFX7Q2KHR2 1363 aa21.86■■□□□ 1.09
HIF3A-207ENST00000475432 WTIPA6NIX2 430 aaPredicted RBP21.85■■□□□ 1.09
HIF3A-207ENST00000475432 UQCRFS1P1P0C7P4 283 aa21.85■■□□□ 1.09
HIF3A-207ENST00000475432 PI16Q6UXB8 463 aa21.85■■□□□ 1.09
HIF3A-207ENST00000475432 FAM227BQ96M60 508 aa21.85■■□□□ 1.09
HIF3A-207ENST00000475432 PDGFDQ9GZP0 370 aaPredicted RBP21.85■■□□□ 1.09
HIF3A-207ENST00000475432 ANTXR1Q9H6X2 564 aa21.85■■□□□ 1.09
HIF3A-207ENST00000475432 QSER1Q2KHR3 1735 aa21.85■■□□□ 1.09
HIF3A-207ENST00000475432 ZAP70P43403 619 aa21.85■■□□□ 1.09
HIF3A-207ENST00000475432 NMIQ13287 307 aaPredicted RBP21.85■■□□□ 1.09
HIF3A-207ENST00000475432 ARAP2Q8WZ64 1704 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms