RNA–Protein interactions for RNA: ENST00000474749.1

SYCP2-208, Transcript of synaptonemal complex protein 2, human

TSL 4

Gene SYCP2, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYCP2-208	ENST00000474749	HOXD8	P13378	290 aa	Predicted RBP	11.25	□□□□□ -0.61
SYCP2-208	ENST00000474749	HYAL2	Q12891	473 aa		11.25	□□□□□ -0.61
SYCP2-208	ENST00000474749	SUV39H2	Q9H5I1	410 aa		11.25	□□□□□ -0.61
SYCP2-208	ENST00000474749	FRRS1L	Q9P0K9	344 aa		11.25	□□□□□ -0.61
SYCP2-208	ENST00000474749	TMEM63C	Q9P1W3	806 aa		11.25	□□□□□ -0.61
SYCP2-208	ENST00000474749	GNE	Q9Y223	722 aa	Known RBP	11.25	□□□□□ -0.61
SYCP2-208	ENST00000474749		A6NHS1	94 aa		11.24	□□□□□ -0.61
SYCP2-208	ENST00000474749	ALYREF	Q86V81	257 aa	Known RBP	11.24	□□□□□ -0.61
SYCP2-208	ENST00000474749	TRIM11	Q96F44	468 aa		11.24	□□□□□ -0.61
SYCP2-208	ENST00000474749	SPACA7	Q96KW9	195 aa		11.24	□□□□□ -0.61
SYCP2-208	ENST00000474749	LPIN3	Q9BQK8	851 aa		11.23	□□□□□ -0.61
SYCP2-208	ENST00000474749	SMG9	Q9H0W8	520 aa	Known RBP	11.23	□□□□□ -0.61
SYCP2-208	ENST00000474749	NDUFB5	O43674	189 aa		11.22	□□□□□ -0.61
SYCP2-208	ENST00000474749	PDIA4	P13667	645 aa	Known RBP	11.22	□□□□□ -0.61
SYCP2-208	ENST00000474749	KCNA1	Q09470	495 aa		11.22	□□□□□ -0.61
SYCP2-208	ENST00000474749	SOWAHD	A6NJG2	315 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	NID1	P14543	1247 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	CES1	P23141	567 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	COL8A1	P27658	744 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	AFF1	P51825	1210 aa	Known RBP	11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	ARHGAP4	P98171	946 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	ECM1	Q16610	540 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	TRAPPC3L	Q5T215	181 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	TTC9	Q92623	222 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	PMEPA1	Q969W9	287 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	PLD4	Q96BZ4	506 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	DCAF5	Q96JK2	942 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	CNTN3	Q9P232	1028 aa		11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	BIN2	Q9UBW5	565 aa	Predicted RBP	11.21	□□□□□ -0.61
SYCP2-208	ENST00000474749	CYP2E1	P05181	493 aa	Predicted RBP	11.2	□□□□□ -0.62
SYCP2-208	ENST00000474749	COL9A3	Q14050	684 aa	Predicted RBP	11.2	□□□□□ -0.62
SYCP2-208	ENST00000474749	PRRT3	Q5FWE3	981 aa		11.2	□□□□□ -0.62
SYCP2-208	ENST00000474749	NCAPG2	Q86XI2	1143 aa		11.2	□□□□□ -0.62
SYCP2-208	ENST00000474749	GJD3	Q8N144	294 aa		11.2	□□□□□ -0.62
SYCP2-208	ENST00000474749	PATL2	C9JE40	543 aa	Known RBP	11.19	□□□□□ -0.62
SYCP2-208	ENST00000474749	C1orf127	Q8N9H9	656 aa		11.19	□□□□□ -0.62
SYCP2-208	ENST00000474749	PHACTR2	O75167	634 aa		11.18	□□□□□ -0.62
SYCP2-208	ENST00000474749	TRIM28	Q13263	835 aa	Known RBP	11.18	□□□□□ -0.62
SYCP2-208	ENST00000474749	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.18	□□□□□ -0.62
SYCP2-208	ENST00000474749	KANSL3	Q9P2N6	904 aa		11.18	□□□□□ -0.62
SYCP2-208	ENST00000474749	IVNS1ABP	Q9Y6Y0	642 aa		11.18	□□□□□ -0.62
SYCP2-208	ENST00000474749	TNFRSF21	O75509	655 aa		11.17	□□□□□ -0.62
SYCP2-208	ENST00000474749	PDE3B	Q13370	1112 aa		11.17	□□□□□ -0.62
SYCP2-208	ENST00000474749	TMC1	Q8TDI8	760 aa		11.17	□□□□□ -0.62
SYCP2-208	ENST00000474749	SNX29	Q8TEQ0	813 aa		11.17	□□□□□ -0.62
SYCP2-208	ENST00000474749	CITED4	Q96RK1	184 aa		11.17	□□□□□ -0.62
SYCP2-208	ENST00000474749	KIF4A	O95239	1232 aa		11.16	□□□□□ -0.62
SYCP2-208	ENST00000474749	MSL1	Q68DK7	614 aa		11.16	□□□□□ -0.62
SYCP2-208	ENST00000474749	WFDC8	Q8IUA0	241 aa		11.16	□□□□□ -0.62
SYCP2-208	ENST00000474749	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SYCP2-208	ENST00000474749	SPATA31C1	P0DKV0	1188 aa		11.15	□□□□□ -0.62
SYCP2-208	ENST00000474749	RAC1	P63000	192 aa		11.15	□□□□□ -0.62
SYCP2-208	ENST00000474749	GDF6	Q6KF10	455 aa	Predicted RBP	11.15	□□□□□ -0.62
SYCP2-208	ENST00000474749	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.15	□□□□□ -0.62
SYCP2-208	ENST00000474749	NEFL	P07196	543 aa		11.14	□□□□□ -0.63
SYCP2-208	ENST00000474749	GRIK5	Q16478	980 aa		11.14	□□□□□ -0.63
SYCP2-208	ENST00000474749	KCTD17	Q8N5Z5	321 aa		11.14	□□□□□ -0.63
SYCP2-208	ENST00000474749	SALL4	Q9UJQ4	1053 aa		11.14	□□□□□ -0.63
SYCP2-208	ENST00000474749	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.14	□□□□□ -0.63
SYCP2-208	ENST00000474749	KRBA1	A5PL33	1030 aa		11.13	□□□□□ -0.63
SYCP2-208	ENST00000474749	CEP135	Q66GS9	1140 aa		11.13	□□□□□ -0.63
SYCP2-208	ENST00000474749	CEP120	Q8N960	986 aa		11.13	□□□□□ -0.63
SYCP2-208	ENST00000474749	CHRD	Q9H2X0	955 aa		11.13	□□□□□ -0.63
SYCP2-208	ENST00000474749	FAM229A	H3BQW9	127 aa		11.12	□□□□□ -0.63
SYCP2-208	ENST00000474749	ATP11A	P98196	1134 aa		11.12	□□□□□ -0.63
SYCP2-208	ENST00000474749	AEBP1	Q8IUX7	1158 aa		11.12	□□□□□ -0.63
SYCP2-208	ENST00000474749	CACTIN-AS1	Q8N1I8	211 aa		11.12	□□□□□ -0.63
SYCP2-208	ENST00000474749	PBX4	Q9BYU1	374 aa		11.12	□□□□□ -0.63
SYCP2-208	ENST00000474749	RASSF4	Q9H2L5	321 aa		11.12	□□□□□ -0.63
SYCP2-208	ENST00000474749		A0A0A0MRY4	1105 aa		11.11	□□□□□ -0.63
SYCP2-208	ENST00000474749	EREG	O14944	169 aa		11.11	□□□□□ -0.63
SYCP2-208	ENST00000474749	EDN3	P14138	238 aa		11.11	□□□□□ -0.63
SYCP2-208	ENST00000474749	IL22RA1	Q8N6P7	574 aa		11.11	□□□□□ -0.63
SYCP2-208	ENST00000474749	ZFYVE28	Q9HCC9	887 aa		11.11	□□□□□ -0.63
SYCP2-208	ENST00000474749	TRIM33	Q9UPN9	1127 aa		11.11	□□□□□ -0.63
SYCP2-208	ENST00000474749	APBA3	O96018	575 aa		11.1	□□□□□ -0.63
SYCP2-208	ENST00000474749	PLA2G4E	Q3MJ16	856 aa		11.1	□□□□□ -0.63
SYCP2-208	ENST00000474749	FAM129B	Q96TA1	746 aa		11.1	□□□□□ -0.63
SYCP2-208	ENST00000474749	AMOTL2	Q9Y2J4	779 aa		11.1	□□□□□ -0.63
SYCP2-208	ENST00000474749	FAM177B	A6PVY3	158 aa		11.09	□□□□□ -0.63
SYCP2-208	ENST00000474749	GPAT2	Q6NUI2	795 aa		11.09	□□□□□ -0.63
SYCP2-208	ENST00000474749	DTWD1	Q8N5C7	304 aa		11.09	□□□□□ -0.63
SYCP2-208	ENST00000474749	LACRT	Q9GZZ8	138 aa		11.09	□□□□□ -0.63
SYCP2-208	ENST00000474749	DCTN4	Q9UJW0	460 aa		11.09	□□□□□ -0.63
SYCP2-208	ENST00000474749	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.09	□□□□□ -0.63
SYCP2-208	ENST00000474749	NACC1	Q96RE7	527 aa		11.08	□□□□□ -0.64
SYCP2-208	ENST00000474749	RBCK1	Q9BYM8	510 aa		11.08	□□□□□ -0.64
SYCP2-208	ENST00000474749	MUC3B	Q9H195	1237 aa		11.08	□□□□□ -0.64
SYCP2-208	ENST00000474749	ELN	P15502	786 aa		11.07	□□□□□ -0.64
SYCP2-208	ENST00000474749	MAPK1	P28482	360 aa		11.07	□□□□□ -0.64
SYCP2-208	ENST00000474749	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.07	□□□□□ -0.64
SYCP2-208	ENST00000474749	DMRTB1	Q96MA1	342 aa		11.07	□□□□□ -0.64
SYCP2-208	ENST00000474749	DZANK1	Q9NVP4	752 aa		11.07	□□□□□ -0.64
SYCP2-208	ENST00000474749	PTPRA	P18433	802 aa		11.06	□□□□□ -0.64
SYCP2-208	ENST00000474749	CDC27	P30260	824 aa		11.06	□□□□□ -0.64
SYCP2-208	ENST00000474749	BAG6	P46379	1132 aa		11.06	□□□□□ -0.64
SYCP2-208	ENST00000474749	GRIK4	Q16099	956 aa		11.06	□□□□□ -0.64
SYCP2-208	ENST00000474749	ILDR2	Q71H61	639 aa		11.06	□□□□□ -0.64
SYCP2-208	ENST00000474749	OSMR	Q99650	979 aa		11.06	□□□□□ -0.64
SYCP2-208	ENST00000474749	NIF3L1	Q9GZT8	377 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms