RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 RTL5Q5HYW3 569 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-210ENST00000474684 PPP1R42Q7Z4L9 355 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 RTKN2Q8IZC4 609 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 JMYQ8N9B5 988 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 ISCA1Q9BUE6 129 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
CPSF7-210ENST00000474684 SH3TC1Q8TE82 1336 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 PASKQ96RG2 1323 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 CASP8AP2Q9UKL3 1982 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 PPIP5K2O43314 1243 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 EPHX2P34913 555 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 FMR1Q06787 632 aaKnown RBP eCLIP7.7□□□□□ -1.18
CPSF7-210ENST00000474684 EAPPQ56P03 285 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-210ENST00000474684 HSP90AB3PQ58FF7 597 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 SLC10A5Q5PT55 438 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 TSPYL6Q8N831 410 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 C8orf58Q8NAV2 365 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 PLBD2Q8NHP8 589 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 CELF1Q92879 486 aaKnown RBP7.7□□□□□ -1.18
CPSF7-210ENST00000474684 TSR2Q969E8 191 aaKnown RBP7.7□□□□□ -1.18
CPSF7-210ENST00000474684 RBM17Q96I25 401 aaKnown RBP7.7□□□□□ -1.18
CPSF7-210ENST00000474684 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 IFT57Q9NWB7 429 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 TRMT112Q9UI30 125 aaKnown RBP7.7□□□□□ -1.18
CPSF7-210ENST00000474684 GJA3Q9Y6H8 435 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 MYH13Q9UKX3 1938 aa7.7□□□□□ -1.18
CPSF7-210ENST00000474684 ARAP2Q8WZ64 1704 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 SHTN1A0MZ66 631 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 IQCA1LA6NCM1 817 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 MAP1SQ66K74 1059 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-210ENST00000474684 LDHDQ86WU2 507 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 LARGE2Q8N3Y3 721 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 FAM89AQ96GI7 184 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 GPR101Q96P66 508 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-210ENST00000474684 DBF4Q9UBU7 674 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-210ENST00000474684 MKRN1Q9UHC7 482 aaKnown RBP7.69□□□□□ -1.18
CPSF7-210ENST00000474684 HACL1Q9UJ83 578 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 ATP6V0A2Q9Y487 856 aa7.69□□□□□ -1.18
CPSF7-210ENST00000474684 AKAP11Q9UKA4 1901 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 YDJCA8MPS7 323 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 ITGBL1O95965 494 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-210ENST00000474684 HSPA1AP0DMV8 641 aaKnown RBP7.68□□□□□ -1.18
CPSF7-210ENST00000474684 HSPA1BP0DMV9 641 aaKnown RBP7.68□□□□□ -1.18
CPSF7-210ENST00000474684 EPS15P42566 896 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 GNAI1P63096 354 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 GRAPQ13588 217 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 ANKRD13DQ6ZTN6 518 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 NIM1KQ8IY84 436 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 GPC2Q8N158 579 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 GRAPLQ8TC17 118 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-210ENST00000474684 JARID2Q92833 1246 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-210ENST00000474684 MYD88Q99836 296 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 CNTNAP1P78357 1384 aa7.68□□□□□ -1.18
CPSF7-210ENST00000474684 EIF6P56537 245 aaKnown RBP7.67□□□□□ -1.18
CPSF7-210ENST00000474684 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-210ENST00000474684 IFFO2Q5TF58 517 aa7.67□□□□□ -1.18
CPSF7-210ENST00000474684 G2E3Q7L622 706 aa7.67□□□□□ -1.18
CPSF7-210ENST00000474684 JDP2Q8WYK2 163 aa7.67□□□□□ -1.18
CPSF7-210ENST00000474684 RTFDC1Q9BY42 306 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-210ENST00000474684 SEC31BQ9NQW1 1179 aa7.67□□□□□ -1.18
CPSF7-210ENST00000474684 HYPKQ9NX55 129 aa7.67□□□□□ -1.18
CPSF7-210ENST00000474684 RTL9Q8NET4 1388 aa7.67□□□□□ -1.18
CPSF7-210ENST00000474684 TRAF5O00463 557 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 IRS4O14654 1257 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-210ENST00000474684 GMPSP49915 693 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-210ENST00000474684 CXCL9Q07325 125 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 KIAA2012Q0VF49 1180 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 SF3B3Q15393 1217 aaKnown RBP7.66□□□□□ -1.18
CPSF7-210ENST00000474684 GPR153Q6NV75 609 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 DPP8Q6V1X1 898 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-210ENST00000474684 DDX46Q7L014 1031 aaKnown RBP7.66□□□□□ -1.18
CPSF7-210ENST00000474684 RIC3Q7Z5B4 369 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 SP8Q8IXZ3 490 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 MPNDQ8N594 471 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 TRPM4Q8TD43 1214 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-210ENST00000474684 MRS2Q9HD23 443 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 OTOFQ9HC10 1997 aa7.66□□□□□ -1.18
CPSF7-210ENST00000474684 RAD17O75943 681 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 GPSM2P81274 684 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 WWC1Q8IX03 1113 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 DBNDD1Q9H9R9 158 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 GPRC5DQ9NZD1 345 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 MAP3K2Q9Y2U5 619 aa7.65□□□□□ -1.18
CPSF7-210ENST00000474684 LAMB1P07942 1786 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 BBOX1O75936 387 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 EGFRP00533 1210 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 PCCAP05165 728 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 LMOD1P29536 600 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 HIRAP54198 1017 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 CALD1Q05682 793 aaKnown RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 CCDC27Q2M243 656 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 CIAPIN1Q6FI81 312 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 DLK2Q6UY11 383 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 CNTROBQ8N137 903 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms