RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SEC31BQ9NQW1 1179 aa23.99■■□□□ 1.43
SSR1-204ENST00000474597 PLSCR1O15162 318 aa23.98■■□□□ 1.43
SSR1-204ENST00000474597 KIAA1211Q6ZU35 1233 aa23.98■■□□□ 1.43
SSR1-204ENST00000474597 XAGE2Q96GT9 111 aa23.98■■□□□ 1.43
SSR1-204ENST00000474597 CDC5LQ99459 802 aaKnown RBP23.98■■□□□ 1.43
SSR1-204ENST00000474597 SLC10A5Q5PT55 438 aa23.98■■□□□ 1.43
SSR1-204ENST00000474597 TTC39AQ5SRH9 613 aa23.98■■□□□ 1.43
SSR1-204ENST00000474597 EPB41L2O43491 1005 aaKnown RBP23.97■■□□□ 1.43
SSR1-204ENST00000474597 PDE8BO95263 885 aa23.97■■□□□ 1.43
SSR1-204ENST00000474597 IFIT1P09914 478 aaKnown RBP23.97■■□□□ 1.43
SSR1-204ENST00000474597 HSCBQ8IWL3 235 aa23.97■■□□□ 1.43
SSR1-204ENST00000474597 KIF2CQ99661 725 aa23.97■■□□□ 1.43
SSR1-204ENST00000474597 SF3B3Q15393 1217 aaKnown RBP23.96■■□□□ 1.43
SSR1-204ENST00000474597 NLRP3Q96P20 1036 aa23.96■■□□□ 1.43
SSR1-204ENST00000474597 TBC1D2Q9BYX2 928 aa23.96■■□□□ 1.43
SSR1-204ENST00000474597 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
SSR1-204ENST00000474597 CARMIL3Q8ND23 1372 aa23.96■■□□□ 1.43
SSR1-204ENST00000474597 ABCC12Q96J65 1359 aa23.96■■□□□ 1.43
SSR1-204ENST00000474597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.96■■□□□ 1.43
SSR1-204ENST00000474597 ADORA1P30542 326 aa23.95■■□□□ 1.42
SSR1-204ENST00000474597 RABEP1Q15276 862 aa23.95■■□□□ 1.42
SSR1-204ENST00000474597 PROM2Q8N271 834 aa23.95■■□□□ 1.42
SSR1-204ENST00000474597 VGLL2Q8N8G2 317 aa23.95■■□□□ 1.42
SSR1-204ENST00000474597 EDC3Q96F86 508 aaKnown RBP23.95■■□□□ 1.42
SSR1-204ENST00000474597 POTEAQ6S8J7 498 aa23.94■■□□□ 1.42
SSR1-204ENST00000474597 ANKRD18AQ8IVF6 992 aa23.94■■□□□ 1.42
SSR1-204ENST00000474597 IL25Q9H293 177 aa23.94■■□□□ 1.42
SSR1-204ENST00000474597 NDUFB9Q9Y6M9 179 aa23.94■■□□□ 1.42
SSR1-204ENST00000474597 RFX7Q2KHR2 1363 aa23.94■■□□□ 1.42
SSR1-204ENST00000474597 PUM3Q15397 648 aaKnown RBP23.94■■□□□ 1.42
SSR1-204ENST00000474597 PAG1Q9NWQ8 432 aa23.94■■□□□ 1.42
SSR1-204ENST00000474597 NMIQ13287 307 aaPredicted RBP23.93■■□□□ 1.42
SSR1-204ENST00000474597 NFIXQ14938 502 aa23.93■■□□□ 1.42
SSR1-204ENST00000474597 DDX46Q7L014 1031 aaKnown RBP23.93■■□□□ 1.42
SSR1-204ENST00000474597 SNX21Q969T3 373 aa23.93■■□□□ 1.42
SSR1-204ENST00000474597 RAD50Q92878 1312 aa23.93■■□□□ 1.42
SSR1-204ENST00000474597 GOLIM4O00461 696 aa23.92■■□□□ 1.42
SSR1-204ENST00000474597 HELBQ8NG08 1087 aaPredicted RBP23.92■■□□□ 1.42
SSR1-204ENST00000474597 GYS1P13807 737 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 C3orf67Q6ZVT6 689 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 KBTBD3Q8NAB2 608 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 LPIN2Q92539 896 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 SLC5A1P13866 664 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 FAM227BQ96M60 508 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 TFCP2L1Q9NZI6 479 aa23.91■■□□□ 1.42
SSR1-204ENST00000474597 FKBP4Q02790 459 aaKnown RBP eCLIP23.9■■□□□ 1.42
SSR1-204ENST00000474597 CNBD1Q8NA66 436 aa23.9■■□□□ 1.42
SSR1-204ENST00000474597 LSG1Q9H089 658 aaKnown RBP23.9■■□□□ 1.42
SSR1-204ENST00000474597 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
SSR1-204ENST00000474597 ANAPC15P60006 121 aa23.89■■□□□ 1.42
SSR1-204ENST00000474597 CCDC24Q8N4L8 307 aa23.89■■□□□ 1.42
SSR1-204ENST00000474597 ARAP2Q8WZ64 1704 aa23.89■■□□□ 1.42
SSR1-204ENST00000474597 TAF1P21675 1872 aa23.89■■□□□ 1.41
SSR1-204ENST00000474597 TICAM2Q86XR7 235 aa23.89■■□□□ 1.41
SSR1-204ENST00000474597 A0A0D9SFI3 127 aa23.88■■□□□ 1.41
SSR1-204ENST00000474597 TAF5LO75529 589 aa23.88■■□□□ 1.41
SSR1-204ENST00000474597 FGFR2P21802 821 aa23.88■■□□□ 1.41
SSR1-204ENST00000474597 CHRNDQ07001 517 aa23.88■■□□□ 1.41
SSR1-204ENST00000474597 LRRFIP1Q32MZ4 808 aaKnown RBP23.87■■□□□ 1.41
SSR1-204ENST00000474597 BSDC1Q9NW68 430 aaPredicted RBP23.87■■□□□ 1.41
SSR1-204ENST00000474597 HSPA4P34932 840 aa23.87■■□□□ 1.41
SSR1-204ENST00000474597 RGPD3A6NKT7 1758 aaPredicted RBP23.86■■□□□ 1.41
SSR1-204ENST00000474597 RGPD4Q7Z3J3 1758 aa23.86■■□□□ 1.41
SSR1-204ENST00000474597 ST18O60284 1047 aa23.86■■□□□ 1.41
SSR1-204ENST00000474597 UQCRFS1P1P0C7P4 283 aa23.86■■□□□ 1.41
SSR1-204ENST00000474597 ZNF512BQ96KM6 892 aaPredicted RBP23.86■■□□□ 1.41
SSR1-204ENST00000474597 SNRKQ9NRH2 765 aa23.86■■□□□ 1.41
SSR1-204ENST00000474597 ST5P78524 1137 aa23.85■■□□□ 1.41
SSR1-204ENST00000474597 ZNF827Q17R98 1081 aa23.85■■□□□ 1.41
SSR1-204ENST00000474597 AKT1S1Q96B36 256 aa23.85■■□□□ 1.41
SSR1-204ENST00000474597 CCDC171Q6TFL3 1326 aa23.85■■□□□ 1.41
SSR1-204ENST00000474597 KCNJ4P48050 445 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 CCDC102BQ68D86 513 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 FLAD1Q8NFF5 587 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 CELF1Q92879 486 aaKnown RBP23.84■■□□□ 1.41
SSR1-204ENST00000474597 SERPINB2P05120 415 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 ZAP70P43403 619 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 RPS8P62241 208 aaKnown RBP23.84■■□□□ 1.41
SSR1-204ENST00000474597 PALD1Q9ULE6 856 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 COL4A1P02462 1669 aa23.84■■□□□ 1.41
SSR1-204ENST00000474597 TNRC6CQ9HCJ0 1690 aaKnown RBP23.84■■□□□ 1.41
SSR1-204ENST00000474597 MED23Q9ULK4 1368 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 A0A1B0GUL6 1792 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 AKAP11Q9UKA4 1901 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 TM4SF1P30408 202 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 PHKA1P46020 1223 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 PTH1RQ03431 593 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 SCARF1Q14162 830 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 MCMDC2Q4G0Z9 681 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 PRR5LQ6MZQ0 368 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 ANTXR1Q9H6X2 564 aa23.83■■□□□ 1.41
SSR1-204ENST00000474597 K7ELQ4 463 aaPredicted RBP23.82■■□□□ 1.4
SSR1-204ENST00000474597 ARID4AP29374 1257 aaPredicted RBP23.82■■□□□ 1.4
SSR1-204ENST00000474597 MCAMP43121 646 aa23.82■■□□□ 1.4
SSR1-204ENST00000474597 TTF1Q15361 905 aaPredicted RBP23.82■■□□□ 1.4
SSR1-204ENST00000474597 MINPP1Q9UNW1 487 aa23.82■■□□□ 1.4
SSR1-204ENST00000474597 MYH7P12883 1935 aa23.81■■□□□ 1.4
SSR1-204ENST00000474597 SNAP23O00161 211 aa23.81■■□□□ 1.4
SSR1-204ENST00000474597 RNF113AO15541 343 aaKnown RBP23.81■■□□□ 1.4
SSR1-204ENST00000474597 SPRYD3Q8NCJ5 442 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms